Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0006 ATGCTGCAATGCTTGTCCCTCAAATCATCGGCGTCAACTTCAACAACCACAGTCCCTGTTGAGAATTCTAGAGAGGACACACCAAGATCGATCTCTCAAACTTCTCCCACCGTCAATCTAACCCGCGAATACACCCTCGCTGTCCAAACCAATTCCTACAACGAGATATGGTCCAAGATTCACGTCCGCCACCAGGATGACTACACAAACACAGACCCAGACCAAGACACAGACGGGGAGCGAGAAGAGGATGTCCAGCAGTTGCGGTTGGCCCATGTCCTTCGACCCGACCGAGAATGTGTCCAGGATGCCCTTCGGCATGCAAGGTCCAACACCCTCACCCGTCTTGTCTCTGACTACTTTGATCACAGCGAGAACACATCCCAACTCTGTCTCCTTCTCCACCGTAGCGTCCATCACGCCCACTCTCTCTATTCCCCTCTTCATGACCTCCTCGATATTCTTCCCCTTGATTCCGATTCACTTACCCAATCCCAGTGCAATCAGGCCTTTGATGTCTTCCTCCAATTCGATAGTCTTGACAATCCTTTCCCCTGTCCTGACTCCCATAATTTCCGTGACATGCGCCGCTGCTTCTCTCAACTTAAGGAACAACTTGACGGCCATATCCGAAAGTCCCGGTCTAAGATTCGCCTTATCTGCCGTGCAACCGCTGGATCCGCCTTCTGTTTCATTGGCACTGCCGTTGGGGTTGCCATATCTGCTGTCGCAATTGCTACTCATACACTCGTTGCCCTTATTGCCCCACTATCCACTGTATTCCTTCCTCCCAGGCTCTCTAAGAAAGAGCTTGCCCATGGGGCACAGCTTGATGCTGCAGCTAGGGGTACTTATGTTCTATGCCATGATCTGGGCACCATTGACAGCCTCGTGGCATGGTTGCACACTGCTGTTGAGGGTGACAAGCGTCTCATTCGCCTTGGATTGGAGGGTGGCAGGGACAAGCATACCATCCAAGAGGTGGCCAAGCATCTCTGCAAAAACCATCTCTATTTCCTCCACCAACTTAAGGATCTTGAGGAACATATATGCCTCTGCTTTACCACAGTCAACAGAGCCAGGTCTCTACTCCTAAGAGAGATCGATCTTCATCAAAGTTCTAATTCCTAA 1131 0.5084 MLQCLSLKSSASTSTTTVPVENSREDTPRSISQTSPTVNLTREYTLAVQTNSYNEIWSKIHVRHQDDYTNTDPDQDTDGEREEDVQQLRLAHVLRPDRECVQDALRHARSNTLTRLVSDYFDHSENTSQLCLLLHRSVHHAHSLYSPLHDLLDILPLDSDSLTQSQCNQAFDVFLQFDSLDNPFPCPDSHNFRDMRRCFSQLKEQLDGHIRKSRSKIRLICRATAGSAFCFIGTAVGVAISAVAIATHTLVALIAPLSTVFLPPRLSKKELAHGAQLDAAARGTYVLCHDLGTIDSLVAWLHTAVEGDKRLIRLGLEGGRDKHTIQEVAKHLCKNHLYFLHQLKDLEEHICLCFTTVNRARSLLLREIDLHQSSNS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0006 376 PANTHER UPF0496 PROTEIN 3-RELATED 31 368 IPR007749 -
Vvi18g0006 376 Pfam Protein of unknown function (DUF677) 110 368 IPR007749 -
Vvi18g0006 376 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0006 Vvi-Chr18 93872 95154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0006 - - vvi:100263323 728.013