Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1153 ATGAAGAAGAATGTTGGAGAGTTGGGTCTAAAATTCTTCTTGAAAATATTTGAGATTGCTCCATTAACTCAAAAACTGTTCTCATTCCTGAAAGACTCAAAGGTTCCTTTAGATAAGAACCCAAAGCTCAAGTCCCATGCCATGACTTTTTTTTATTTTTTATTTTTATTTTTTATGGTTGTTTACTCTTCCCCCCTACCTCCAAATGGGTTATTAAAGATGACCATATACAAAATTTGA 240 0.325 MKKNVGELGLKFFLKIFEIAPLTQKLFSFLKDSKVPLDKNPKLKSHAMTFFYFLFLFFMVVYSSPLPPNGLLKMTIYKI* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1153 79 SUPERFAMILY Globin-like 1 56 IPR009050 -
Vvi17g1153 79 ProSiteProfiles Globin family profile. 1 51 IPR000971 GO:0020037
Vvi17g1153 79 PANTHER LEGHEMOGLOBIN-RELATED 1 53 IPR001032 GO:0019825|GO:0020037
Vvi17g1153 79 Pfam Globin 11 54 IPR000971 GO:0020037
Vvi17g1153 79 ProSitePatterns Plant hemoglobins signature. 40 51 IPR019824 GO:0019825|GO:0020037
Vvi17g1153 79 PRINTS Plant globin signature 12 32 - -
Vvi17g1153 79 PRINTS Plant globin signature 40 68 - -
Vvi17g1153 79 Gene3D Globins 1 57 IPR012292 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1153 Vvi-Chr17 17032800 17033157 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1153 - - vvi:100853737 91.2781