Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1149 ATGGTGGCAATTTGGGCATTACAGAACTTTGCGATGTGCAGTAGAATTATTAATCGAGCTATTGCTGAAGCAGGTGGCATATCGGTAGTTCAAGAACCATTACTTTCTCCTAATTCAGATGTTGCTGCGCAGGCATCATTGCTGATCAAATTTTTATATTCCAATCACATGCTTCAAGAATACGTGTCAGATGAGCTCGTCAGATTATTGACAGCTGCATTAGAGGAGTTGTGGTCCACATCAACCATCAACGAAGAGGTCCTGAGAACCATAAATATAATATTTGCCAATTTTTATAAGCTCTATATTTCTGAAGCAACTACCTTGTGCATTCCCCCCATTTGGAAGGGGCGCTCGAGTCTGGAAGTGATGCTGCTCAAGAATCTGTCTTGGACTTCTTATGCTAGTTAA 411 0.4112 MVAIWALQNFAMCSRIINRAIAEAGGISVVQEPLLSPNSDVAAQASLLIKFLYSNHMLQEYVSDELVRLLTAALEELWSTSTINEEVLRTINIIFANFYKLYISEATTLCIPPIWKGRSSLEVMLLKNLSWTSYAS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1149 136 Gene3D - 2 96 IPR011989 -
Vvi17g1149 136 SUPERFAMILY ARM repeat 2 116 IPR016024 -
Vvi17g1149 136 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 113 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1149 Vvi-Chr17 16987608 16988018 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1149 - - vvi:100260874 172.17