Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1143 ATGGAGTCTCCTTTAGTTCTAGGTGTTACTGTGGCAACTGCTGCCTTGGGAGGTAGATATATGATTAGAGCGTGGCAAGCATTCAAAGCTCGCCCTTCAGTTCCTCATATTCGAAGATTTTATGAGGGTGGTTTTCAGCATTCCATGACGAGGCGTGAGGCAGCATTAATTCTCGGTGTCAGAGAACATGCTGTGGTGGAGAAGATCAAGGAGGCTCACAGGAGAGTGATGGTGGCAAACCACCCTGATAGCGGTGGAAGCCATTATCTGGCTTCCAAGATAAATGAAGCCAAGGATGTCTTAATGGGGAGAGCTAAGGGAACTGGTTCTGCATTCTAA 339 0.4749 MESPLVLGVTVATAALGGRYMIRAWQAFKARPSVPHIRRFYEGGFQHSMTRREAALILGVREHAVVEKIKEAHRRVMVANHPDSGGSHYLASKINEAKDVLMGRAKGTGSAF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1143 112 SUPERFAMILY Chaperone J-domain 43 103 IPR036869 -
Vvi17g1143 112 Gene3D DnaJ domain 39 106 IPR036869 -
Vvi17g1143 112 ProSiteProfiles dnaJ domain profile. 53 106 IPR001623 -
Vvi17g1143 112 PANTHER UNCHARACTERIZED 3 112 - -
Vvi17g1143 112 SMART dnaj_3 52 106 IPR001623 -
Vvi17g1143 112 CDD DnaJ 57 101 IPR001623 -
Vvi17g1143 112 FunFam Import inner membrane translocase subunit tim14 39 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1143 Vvi-Chr17 16742107 16748970 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1143 K09539 - vvi:100256333 225.328