Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1131 ATGGATTTCTTTTGCATTTCTCACAATCCACTAGTTGTGCTTAATTCTTTTGCTGACCAAGATAGTAGAGTTGATCATTATTTTGCTTGTGAAGCTCTCTATGACATTGCAAGGGTTATCTCGTTTGTAAGAGAAGATTTTTTTAATATTTTTCATCAAAATTTTTGTGCCTTAAGTAAGCTTTCTGCAGGACTCAGATGCCAATGTGAAAAGTGCTACTCAGCCCTAGATTGGCTTTTTAAGGTAATCAAGTAA 255 0.3451 MDFFCISHNPLVVLNSFADQDSRVDHYFACEALYDIARVISFVREDFFNIFHQNFCALSKLSAGLRCQCEKCYSALDWLFKVIK* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1131 84 Pfam Vacuolar 14 Fab1-binding region 12 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1131 Vvi-Chr17 16245900 16246154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1131 K15305 - vvi:100243898 62.3882