Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1125 ATGGGTGATGGTTGGACAGATAATAGACAAAGAACACTCATCAAGTTCCTTATGTATTGTCCTGAAAGAATATCATTTATGAAATCTATTGATGCTTTAGATATTGTCAAGGATGCAACTAATTTGTTTCAGTTATTTGTTTTGGAAAAGGCAGCCATGGGAGATAAAACTGTCATTTTGACAACTGTGAATGGAGCATGGGCAGCAAATAATTCATTACTCGATCTCTTTCTTGAGAGCTTTCATATTGGAAACAACACCAAGAGGCTTTTAAATCATTTGGTGATCATAGCATTGGACCAAAAGTCATATGCTCGATGCTTGGCTTTACATCCTCTTTGTTATGCTCTCAAAACAGAAGGGGTTGATTTTTCTGGAGAAGCATACTATTCCACCCCTAACTATTTGGAGATGATGTGGAGAAGGATTGATTTTTTGCGATCTATTCTTACCATGGGCTATAGTTTCATCTTTACGGTATTACTCTCTTCTCTTCTCTTCTCTCTCCGTCATAATATGAACTATTTATTGTATCGTAATATTATCAGAATATGCTTTAATGTGATAATGGTAGCTACGATGACTAGTTTAATGCTTGATTATTTTCAAACCATTAACATTATGTTTATATTATTACTAGATGTAGCATGTAGAATGCAGATGTTTCAATTCTCTGATGCTATGAAGTGCAATAGAAGTAAAATGATTCAAAGCGATTCAGAAGGAGAATTTTGA 735 0.3429 MGDGWTDNRQRTLIKFLMYCPERISFMKSIDALDIVKDATNLFQLFVLEKAAMGDKTVILTTVNGAWAANNSLLDLFLESFHIGNNTKRLLNHLVIIALDQKSYARCLALHPLCYALKTEGVDFSGEAYYSTPNYLEMMWRRIDFLRSILTMGYSFIFTVLLSSLLFSLRHNMNYLLYRNIIRICFNVIMVATMTSLMLDYFQTINIMFILLLDVACRMQMFQFSDAMKCNRSKMIQSDSEGEF* 245
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1125 244 PANTHER EXPRESSED PROTEIN-RELATED 45 183 IPR044821 -
Vvi17g1125 244 Pfam Protein of unknown function (DUF 659) 2 47 IPR007021 -
Vvi17g1125 244 Pfam Nucleotide-diphospho-sugar transferase 90 159 IPR005069 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g1125 Vvi-Chr17 16041714 16047360 Tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1125 - - vvi:100240822 223.787