Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1124 ATGGAAGTTATTACAAGCGAAGCCAAAACGGCGTCGTACGACACCACCCTCCTCAGAAGAATCGTTAAGATTACAGTGTTTACGGCTGCCTTTGTTGTGGTTCCATGCTTCTTCTTCTACAATTCTGCCTTCTCTTTCCAGTTTCTACCCATCTCTGCAAAGGGGAAGGAGGGATATAAATTAGATAAGATTCTGAAAAATGCAGCAATGGGAGACAAAACTGTGATCTTAACAACAGTGAATGAAGCATGGGCAGCAAATAATTCATTACTTGATCTATTTCTTGAGAGCTTCAGAATTGGAAACAACACCCAGAGGCTTTTGAATCATTTGGTGATTATAACGTTGGACCCAAAGGCGTACGCTCGATGCACAACTTTACATCCCCATTGTTATGCTCTCAAAACCAAAGAGATGGATTTTTCAAAGGAAGCCTTCTTTATGAGTCATGACTACTTGGAGATGATGTGGAGAAGGATTGATTTTTTGCGTTCTGTACTTAAGATGAGATACAACTTCATTTTCACGGATGCCGATATTATGTGGTTTCGAGACCCATTCCAACGTTTTGATTCGAAGGCTGATTTTCAAATTGCATGTGACTACTTCAATGGCAACTCCAGTGATGTAAACAACTCACCAAATGGAGGTTTTACGTATGTGAAATCCAATGATCGAACCATTAAATTTTATAAGTTTTGGTACTCCTCGAGGGTCAATTATCCAGGGAATCATGATCAAGATGTACTTAATAAGATTAAGCATGATCCATTCATAACTAAGATTGGATTGAAAATGAGGTTCTTGGATACGGCTTACTTTGGTGGATTTTGTCAGCGTAGCAAAGATCTTAATCTCGTTTGCACTATGCATGCAAATTGCTGTGTTGGACTTGGTAACAAAATTCATGATCTTGGAATTATGCTTCATGATTGGAGAAAATTTACGTCATTCACACCAAATACAAATTCAACTTCATCATCTTGGACGGTTCCACAAAACTGCAGTCTTAAATCCTTCCATGAGCGTCATTCACCATAG 1041 0.389 MEVITSEAKTASYDTTLLRRIVKITVFTAAFVVVPCFFFYNSAFSFQFLPISAKGKEGYKLDKILKNAAMGDKTVILTTVNEAWAANNSLLDLFLESFRIGNNTQRLLNHLVIITLDPKAYARCTTLHPHCYALKTKEMDFSKEAFFMSHDYLEMMWRRIDFLRSVLKMRYNFIFTDADIMWFRDPFQRFDSKADFQIACDYFNGNSSDVNNSPNGGFTYVKSNDRTIKFYKFWYSSRVNYPGNHDQDVLNKIKHDPFITKIGLKMRFLDTAYFGGFCQRSKDLNLVCTMHANCCVGLGNKIHDLGIMLHDWRKFTSFTPNTNSTSSSWTVPQNCSLKSFHERHSP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1124 346 PANTHER EXPRESSED PROTEIN-RELATED 23 335 IPR044821 -
Vvi17g1124 346 Pfam Nucleotide-diphospho-sugar transferase 107 305 IPR005069 -
Vvi17g1124 346 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 262 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1124 Vvi-Chr17 16030751 16034811 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1124 - - vvi:100263084 706.827