Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1122 ATGCGATTTGAATGTATCTATTACAGCTTCACTTACGAGTCATCACTTTCTATTGGTCGACTGGTCGTTCAGCTTGCCGACAAGGTCCAAGTTCGCACCCAAAGGTCCTGGAAACGGTCCTATGGTGTTGGTATGCTTGTAGCTAGCATGGATGAACAGTGGGCTCACTTCTATTGCAACTGCCCAAGTGGTTTGAGACATTCCAAAACTCTTCAAGAGAATATCTTATCATGGATGCACTTTTTGCAATATGAGAAATCTTGCAAGGAGAAAAACTTAAGAGCTCCATTTGCACAGTCACAGTGCTTGGAGTGGGGAGCCTTTCAATATATTGGATCAGGAAACGGTATCAATGACAGCAAGGTAGCACCAGGTGGCACCGAGCGATTAAGACGTTGGCACAACACAAATGGAGTGATGGAATATTGGTTGGAGAGTGCTGACATGGTTGATATTCGGCGTGAGGCAAGGGTGCAGGATCCTTCCTGGGTCCCCACAACTTCATCTGAGTCGGGTGACCTCTCTCATGATCCCATTATAGCTTAA 546 0.4597 MRFECIYYSFTYESSLSIGRLVVQLADKVQVRTQRSWKRSYGVGMLVASMDEQWAHFYCNCPSGLRHSKTLQENILSWMHFLQYEKSCKEKNLRAPFAQSQCLEWGAFQYIGSGNGINDSKVAPGGTERLRRWHNTNGVMEYWLESADMVDIRREARVQDPSWVPTTSSESGDLSHDPIIA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1122 181 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 72 IPR029055 -
Vvi17g1122 181 PANTHER PROTEIN DYAD 119 178 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vvi17g1122 181 MobiDBLite consensus disorder prediction 160 181 - -
Vvi17g1122 181 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 67 IPR029055 -
Vvi17g1122 181 Pfam Proteasome subunit 1 67 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1122 Vvi-Chr17 15989084 15989835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1122 K02725 - vvi:100247650 121.709