Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1116 ATGGCGACTTCGACGCTGGTCAACATCCCGGACTGGCATAAGATCCTACGAATTGACTCGGTGGAGTCGCTGCATGACTCTGACGAAAAACCGGAATTAGAGATGGTTCATGCCACTAGATCCAGTTTAAGGCCTCAGGTGATAGCTCAGAAGATTGCGGTATTAGCACGTCAACGAGCACAAGATAAAAACTGGCAGACACTTTTCTCCACTGCTGCCCAAGATGCTGGTTTCCGTTATTATGGTGGCAAGCTTAATGATATCACTACCGTTGTTTCCTATATTACCAGTCATAACAATGGATGCTGCTCCTCCAACAGCTCCTGGCTCTGA 333 0.4745 MATSTLVNIPDWHKILRIDSVESLHDSDEKPELEMVHATRSSLRPQVIAQKIAVLARQRAQDKNWQTLFSTAAQDAGFRYYGGKLNDITTVVSYITSHNNGCCSSNSSWL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1116 110 PANTHER PROTEIN PHOSPHATASE 2C 36 99 IPR039123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1116 Vvi-Chr17 15808231 15808563 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1116 K17508 - vvi:100252344 105.145