Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1114 ATGAATAGGGAGAAGCTTATGAAGATGGCTGGTGCAGTTCGCACCGGTGGAAAGGGTAGCATGAGAAGAAAGAAGAAGGCTGTTCACAAAACAACCACAACTGATGACAAAAGGCTTCAAAGCACCCTAAAGAGAATAGGAGTCAATGCCATACCTGCTATTGAGGAGGTCAACATCTTTAAAGATGATGTGGTTATTCAGTTTTTAAACCCCAAAGTTCAAGCCTCTATAGCTGCAAACACTTGGGTTGTTAGTGGATCTCCTCAAACAAAGAAATTGCAGGACATTCTTCCTGGAATTATTAACCAGTTGGATAACTTGGACAACCTGAGGAAGCTGGCTGAGCAGTTCCAGAAGCAGGCACCTGGTGCAGGGGCTGGTGCAGCAGCAGCCCAAGACGATGATGATGATGAGGTCCCCGATCTTGTTGCTGGGCAGACCTTTGAAGCCGCAGCAGAAGAGGGTCACACTGCTTGA 477 0.4696 MNREKLMKMAGAVRTGGKGSMRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPGIINQLDNLDNLRKLAEQFQKQAPGAGAGAAAAQDDDDDEVPDLVAGQTFEAAAEEGHTA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1114 158 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 157 IPR039370 -
Vvi17g1114 158 SMART NAC_2 36 91 IPR002715 -
Vvi17g1114 158 Coils Coil 100 120 - -
Vvi17g1114 158 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
Vvi17g1114 158 FunFam Transcription factor BTF3 homolog 48 104 - -
Vvi17g1114 158 Pfam NAC domain 36 91 IPR002715 -
Vvi17g1114 158 CDD NAC_BTF3 4 117 - -
Vvi17g1114 158 Gene3D - 48 104 IPR038187 -
Vvi17g1114 158 MobiDBLite consensus disorder prediction 121 158 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1114 K01527 - vvi:100242819 277.715