Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1111 ATGTCTTTCAAAAAGGACGTTACTTTGGGGAAAACACTAGCCATAATCAGGCATTGTGTGAGGGCGCAGAGCTTTGATTTGAAAATCAAATCGCGAAAAAGACACTCTGACAGCTACGTGTCATATCGCAATACGCCAATCTCAAACTCCTCCTTCCGCCTTTTAAGTGATCTCCTGTACACTCCCCCACCGTTTCCCACTTACACCTTCTCTCACTCCCAATTTCTTCACCTCTCTCTCTATACCCTCCCTCACTCTCTCAGTCTCTGGTCACCTCCGAACTTCTCCGCAATCATTTTCTGGGCCAGAGTGTTGGAGGAGATGACGACGAAGGAAGAGAAAGGTACGTGTAATCAATCGCGTAGAAGCTGCTCCTCTCACCCTGCCTGGCTTCTCTCTACACTTGCTGAGATGGATGAGAGGATGAAGATGCTGGCACTGAACGGAAACACAAAAACGAAGGTAGAAGGCGGCGATGCCACCGACACTTTTGCGCAGCGGGCAGAATCCTACTACCAAAAACGCCCTCAGCTCTTGGCTTTGCTCCAAGACCTCTACAATGCCTATCTCACCTTAGCCGATCGCTACTCCCAAACTCAAACTCTTGCCAAGCAGTATCACCATCATCATAGACGACAAAGCTCTAACCTATCTCAAATCCAAGCCCTCCATCTCGATGGACAGGAGGATACAAACTCCTACGATGAAGAAGACGACGACATTGGTGCTGTCTCCGATGTGGAGAGCTCCCTTTCCTACCAACCCCAACCCCCACTCCCCAAGCATGCGAAACTGGACGTGGAAGCCATGATAGCAGAGATTGTGATGAAGAACGTGGAATGTGATATCCTGTTGGATGAGGTAAGCATGGTGGAGCGGCGGTTTGGGGAGTCAACGAGGAAGATAGAGCTGCAGAAGAGCTTGCTGGAGGTGCTGGAGTCGGAGAGGATGATACTGCTGAATGAGAACGTGCGGCTGGGGTACAAGGTGAGCGCGCTGATTGAGGAGAACAAGGGGCTGGCGTCGGAGTCCCTGTTCATGAAGAGGAAGGCGGGGGAGCTGGCAAGGTGCGTGTTGAAGATGAGGGAGGATCACAGGGTGTGCATGCTGAGTCGAAAAATCGAAGATCTGCAGGGGCAGATATATGGGTTGGAGAAGAGGAACAAGGAGTACTATGAGCAGCTGATGAAAAGAGACCAAGAAGTTGAACAACTATTTAAAAGCAAGGATAAGAAGAAGAAGTTGGGTTTGGAGGTTTGTTTTCAAGTGCATAAGTTGAAGATGGTGGAGAATGCTGATGTGAATGTGAAAGGGAAGGATGGTGGGAAAGTTTTCAAGTGGTGGGAGAGGGTGAAGAACTTGGACTTGTTTATATGTGGACCAAACCCCGGCTCCATTTGA 1401 0.4946 MSFKKDVTLGKTLAIIRHCVRAQSFDLKIKSRKRHSDSYVSYRNTPISNSSFRLLSDLLYTPPPFPTYTFSHSQFLHLSLYTLPHSLSLWSPPNFSAIIFWARVLEEMTTKEEKGTCNQSRRSCSSHPAWLLSTLAEMDERMKMLALNGNTKTKVEGGDATDTFAQRAESYYQKRPQLLALLQDLYNAYLTLADRYSQTQTLAKQYHHHHRRQSSNLSQIQALHLDGQEDTNSYDEEDDDIGAVSDVESSLSYQPQPPLPKHAKLDVEAMIAEIVMKNVECDILLDEVSMVERRFGESTRKIELQKSLLEVLESERMILLNENVRLGYKVSALIEENKGLASESLFMKRKAGELARCVLKMREDHRVCMLSRKIEDLQGQIYGLEKRNKEYYEQLMKRDQEVEQLFKSKDKKKKLGLEVCFQVHKLKMVENADVNVKGKDGGKVFKWWERVKNLDLFICGPNPGSI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1111 466 Pfam KIP1-like protein 124 196 IPR011684 GO:0003779
Vvi17g1111 466 PANTHER PROTEIN NETWORKED 4A 124 219 - -
Vvi17g1111 466 Coils Coil 374 394 - -
Vvi17g1111 466 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 112 203 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1111 Vvi-Chr17 15569452 15573707 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1111 - - vri:117905012 722.62