Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1110 ATGGATGCATCAAATGTTGGACAAATGACTGAAACGGGTTCTATTGATGCTTTGCTGGACCTCCTGAGATCTCATCAATGCGAAGAGCCTGCTGGAAGATTACTTGAGGCTGTATTTAACAGTGTGAGAGTACGAGAGGTGAAAGTCCCCAAGTATGTGACAACACCTTTATCACAGTATCTGTTAGATCCACAGACCATATCACAATCTGGTAGGCTTCTTGCAGCTCTCGCTCTTGGTGACCTCCCTCAATATGAAGGATTCGCTAGAGCTAGTGGTTTTGTATCAGCATGTCGTGCATTGATAAGCCTACTTGAAGACCAACCAACAGAAGAAACGAAATCCATTACCTATCAGAAAGACCTGTCTCAAATCCGTCCAACAGAAGCTGAATCGGTTGAAACTCGAATCATCATACTTTTCTCCTCTGTTGTGGCTCTCAAGAGGTCTTTATTTGACACCGGAAGCAATCCCACTTCTGAATCTTTAGTTAAGCCCTTTGCTGAGAGAGAAGTGACTTCTTTTGGTTTGATTGCACACCTTGACAATTAG 552 0.433 MDASNVGQMTETGSIDALLDLLRSHQCEEPAGRLLEAVFNSVRVREVKVPKYVTTPLSQYLLDPQTISQSGRLLAALALGDLPQYEGFARASGFVSACRALISLLEDQPTEETKSITYQKDLSQIRPTEAESVETRIIILFSSVVALKRSLFDTGSNPTSESLVKPFAEREVTSFGLIAHLDN* 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1110 183 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 2 116 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g1110 Vvi-Chr17 15551623 15552174 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1110 - - vvi:100260874 170.629