Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1107 ATGTCTAGTCCTGGGTTTAATAAGCTTACTCAAATTCTTGTTGAGAATTGCATAACCGGGATAAGCATTGCGTGGTGGAAGTGGACTCATAATGCCCATCATATAGCTTGTAATAGTCTTGATTATGAATCTGATCTTCAGCATATCCCAATGTTTACAGTTTCTTCCAACTTGTTCAATTCCATAAAGTCTATCTTTTGTGGGAGAATATTGAAATTTAATTATGTTGCTAGGTTTCTTGAGGAATATTCCAGACAGAGCTTTGAATATTTTGGGGATTTGTGTGTTTTAGACATGGTACCCTCTTCTTGTTTCATGTTTGCCCAATTGGGGCGAGAGGGTGATCTAATGTATATGTTGGGCCGCCTAGTGGGAACGATTAGTTTGAGAAGCAGACTAGTGGGACAATTGATATTTCATGCTCAACTTGGATGGACTGGTTTCATGGTGCTTGAGCACCATTTGTTTCCTCAATTGCCAAGGTGTCATTTGAGGAGCATTTCTTCTTTGGTGAAGGACCTATGCAAGAAGCATAATTTGCCTTATAGGGGTTTATCGCTTCAGGAGGCCAACGTATCGACAATTAGGACACTAAGAACTGCTGCTCTGCAGGCTCGTGACCTTACCAACCTTGTCCCAAAGAATTTGGTTTGGGAAGCTGCTAATATTCATGGATGA 678 0.4071 MSSPGFNKLTQILVENCITGISIAWWKWTHNAHHIACNSLDYESDLQHIPMFTVSSNLFNSIKSIFCGRILKFNYVARFLEEYSRQSFEYFGDLCVLDMVPSSCFMFAQLGREGDLMYMLGRLVGTISLRSRLVGQLIFHAQLGWTGFMVLEHHLFPQLPRCHLRSISSLVKDLCKKHNLPYRGLSLQEANVSTIRTLRTAALQARDLTNLVPKNLVWEAANIHG* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1107 225 PANTHER FATTY ACID DESATURASE 2 2 144 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1107 Vvi-Chr17 15526686 15527535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1107 1 95 Lipid Metabolism Gene Families AT3G61580 58.947 5.10e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1107 K21734 - vvi:100265385 148.673