Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1102 ATGGCCTCAGACATGCCTCCGAAGTTTACTTGTAATATTCTAAGCAGATTCCATATGGCCATCTGGGTTGTCAAGCAGGTTCTGTTATCAGTAGGCATCATCTCCACTGTCCTCGCATTGAATCCAACACCAAAAATCTCATACTCATTTAGCCTCTGTTATGGTATTCCAAGCTTTTGGGTGTGGTTGAAAACCTGGTTGTCTCCCCCTTATGCTTATATTATTATCAATTTCATCCTCATCCTCATCATCATCATTGCCTCTTCATCTTCATCTTCTTCATCTTCTTCATCTTCCTCCCCTGTAGAGGAATTCACAGCACTGGATTACTCATCAGTGCAAGATGTTTTGTCCGAGGTCTCGGGCGATGAGGAAGCGCATGCGAAGACCTCCATGGTGATGGACCACGGTCGTCGGAAGTGCATAACCGGAGAGACAGCGGTGAAATTGGAGAGCACAGCAGTTGCTCCAGGGCAAAATGAAAGCCTAGAGACGACATGGAAAGCGATCCTGGAGGAACATGGGATTCCAGCCACACGGCACCTCAGGAAGAGCGAGACATGGGATATGCCACCTTGTGTTGATGGAAGCAGCAGCTTGGGCCCCAGGGAAAGGGAGAGGGAGATGAGGAAGTCCAACACTTGTGTGGAAGCAAGGTCATCATTCAGGGAGACTCCAATTCCATACCTGAGGAAGGATGAATCGCTAAGCCATGATGAGTTGAACAAAAAAATTGAAGAATTCATTCAAAAGTGTAGGAATGAGATGCGACTGGAGAGAGTTGAATCAGATCAACGCTTTATGGATATTCTCAATGGAGGAGTGTGA 828 0.4662 MASDMPPKFTCNILSRFHMAIWVVKQVLLSVGIISTVLALNPTPKISYSFSLCYGIPSFWVWLKTWLSPPYAYIIINFILILIIIIASSSSSSSSSSSSSPVEEFTALDYSSVQDVLSEVSGDEEAHAKTSMVMDHGRRKCITGETAVKLESTAVAPGQNESLETTWKAILEEHGIPATRHLRKSETWDMPPCVDGSSSLGPREREREMRKSNTCVEARSSFRETPIPYLRKDESLSHDELNKKIEEFIQKCRNEMRLERVESDQRFMDILNGGV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1102 275 Pfam Cotton fibre expressed protein 238 272 IPR008480 -
Vvi17g1102 275 PANTHER COTTON FIBER (DUF761) 39 274 - -
Vvi17g1102 275 Coils Coil 238 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1102 Vvi-Chr17 15353443 15354270 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1102 - - vvi:104882441 392.889