Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1101 ATGGCCTCGGATATGTTTTGGAAGTCCAGTTCTAATAGTATAAGCAGATTCCATATGGCCATCTGGGTTGTTAAGCAGGCTCTGTTATCGTTAGGCATCATCTCCACTGTCCTTATGTTGAAGCCAACATCAAAAATCTCAGACATATTCAACATCTTATGTTGCAGTTTTCCAAGCATTTGGGTGTGGTTGAGAAGTTGGTTGTCTCCTCCATATGTATACATTACCATCAATGTCATCCTCATCCTCATCATTATCCTAGTCTCTTCTTCTTCTTTGACAGAAAAATCTGGGGCGGACTCATCACCGGAGGCATCATGCGTATTGGATTCCGGGGAGGAGGAGAAGGAGAGCGGTGGAGAGAGTATTGCCGGAGAGACGGCTGCAAAATTGGAGAAACATGCGGTAACAGCACTTATTCATGGGTGGGAGGATCAAAATGAGACCCTAGATGCTACATGGAAGGAGATCATGGAGGAAGATGGGAATCTTTCCAGACGGCATCTTAGGAAGACCGACTCATGGGATGTGACACCTTGTGTTGATGGATGTAACTTGGCTCCAAGTGAGATAAGGAAGACGAATACTTTTGCGGAAGCTCTCTCATCATTGAGGGAGACTCCATACATAAGGAAGGATGAATTGCTAAGTCATGACGAGTTGAACCAACAAGTGGAATTGTTCATTAGAAAGTGTAGGAATGATATGCGATTGGAGAGGCTAGAATCAGACCAGCGGCTTATGGACCTGCTTAATCGAGGAATGTAG 768 0.4466 MASDMFWKSSSNSISRFHMAIWVVKQALLSLGIISTVLMLKPTSKISDIFNILCCSFPSIWVWLRSWLSPPYVYITINVILILIIILVSSSSLTEKSGADSSPEASCVLDSGEEEKESGGESIAGETAAKLEKHAVTALIHGWEDQNETLDATWKEIMEEDGNLSRRHLRKTDSWDVTPCVDGCNLAPSEIRKTNTFAEALSSLRETPYIRKDELLSHDELNQQVELFIRKCRNDMRLERLESDQRLMDLLNRGM* 256
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1101 255 PANTHER COTTON FIBER (DUF761) 57 254 - -
Vvi17g1101 255 MobiDBLite consensus disorder prediction 94 123 - -
Vvi17g1101 255 Pfam Cotton fibre expressed protein 218 253 IPR008480 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g1101 Vvi-Chr17 15340828 15341595 Proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1101 - - vvi:104882431 476.478