Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1094 ATGGCCTCGCGCGGAACCAATGTGGTGGTGTCGAGAGCCTACAGGATGAGGCAAAAACTCCAATCCGCGCTCGAAGCTACGCTTCTAGAGATCGAAGACGTCTCCCACCAGCACGCTGGCCACGCGCCCATGAGGGCCCTCCCCAACGCTCCGCAGGAGACTCACTTCAACCTGAAGATCGTCTCTCCAAAGTTCACGGGCCACACCCTCGTCAAGCGACACCGTATGGTCTACGACTTGTTAGCGGATGAACTCAGCTCTGGCCTACACGCGATCTCCATCGTCGCCAAAACCCCCCAAGAGGTGCAGCAGAAATAG 318 0.5818 MASRGTNVVVSRAYRMRQKLQSALEATLLEIEDVSHQHAGHAPMRALPNAPQETHFNLKIVSPKFTGHTLVKRHRMVYDLLADELSSGLHAISIVAKTPQEVQQK* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1094 105 Gene3D - 10 102 IPR036065 -
Vvi17g1094 105 SUPERFAMILY BolA-like 11 104 IPR036065 -
Vvi17g1094 105 Coils Coil 17 37 - -
Vvi17g1094 105 PANTHER - 7 104 - -
Vvi17g1094 105 Pfam BolA-like protein 20 101 IPR002634 -
Vvi17g1094 105 FunFam SufE-like protein, chloroplastic 10 104 - -
Vvi17g1094 105 PIRSF BolA 1 105 IPR002634 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1094 Vvi-Chr17 15096385 15096702 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1094 K22066 - aof:109839537 148.673