Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1076 ATGGCGTATGCAGCTGATCCTCACCATGGTAGATACCTCACAGCATCAGCCACGTTTCGAGGAAAGATGAGCACAAAGGAGGTTGATGAGCAGATGATTAATGTACAAAACAAGAGGAAACCATTGAAGAGATTATAG 138 0.4348 MAYAADPHHGRYLTASATFRGKMSTKEVDEQMINVQNKRKPLKRL* 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1076 45 Pfam Tubulin C-terminal domain 4 40 IPR018316 -
Vvi17g1076 45 PRINTS Beta-tubulin signature 13 31 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vvi17g1076 45 PRINTS Beta-tubulin signature 31 45 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Vvi17g1076 45 SUPERFAMILY Tubulin C-terminal domain-like 3 39 IPR008280 -
Vvi17g1076 45 Gene3D - 1 44 IPR037103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1076 Vvi-Chr17 14668218 14668355 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1076 K07375 - thj:104798590 70.4774