Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1075 ATGGTGGGCAAAATGGAGGCCGTCAACGGCGTCAAATCTGGATCGAATTCAACCGCATCAACCTTCCAATCCGCCTTCTTCAAGCCAGATCTCTCCCTCAAATCCCTGAAGCTCAAGACCAAGCAGCAGGAGCTCCTGATCCGGGTCTCCATCCTCACTCTCGTCTACATCCTCGCCTTCATCACCAGGCTCTTCAGTGTCCTCCGCTACGAGAGCATGATCCACGAGTTCGATCCCTACTTCAATTACCGAACCACTGTTTTTTTGACCGAGAAGGGATTCTACGAGTTCTGGAATTGGTTCGACTCCGAGAGCTGGTACCCTCTCGGTCGAATCATCGGCGGCACGCTCTATCCTGGACTGATGGTCACAGCAGCACTGATCTACTCAATTATTCGATTTCTCCGGTTCGCGGTCCATATCCGTGAAGTTTGCGTGCTAACTGCTCCGTTCTTCGCATCAAACACCACCATTGTCGCGTATTTCTTTGGGAAAGAGCTTTGGGACTCGGGCGCAGGCCTGGTTGCAGCGGCATTGATCGCCATTTGCCCTGGTTACATCTCGAGATCGGTGGCGGGGTCTTATGACAACGAGGGAGTGGCGATTTTTGCTTTGTTATTGACATTTTACTTGTTTGTTAAGGCGGTCAACACGGGTTCGCTTGCTTGGGCCCTGGCTTCGGCTTTTGGATACTTCTACATGGTTTCGGCTTGGGGTGGTTATGTGTTTATTATCAATTTGATTCCGCTTTATGCCATGGTGCTTTTGATTACGGGCAGGTATTCGATGAGGTTGTATGTGGCGTATAACTGCATGTATATATTGGGAATGCTGCTTGCTATGCAGATTCGATTTGTGGGCTTTCAGCATGTGCAGTCTGGGGAGCATATGGCTGCAATGGGTGTGTTTTTCTTGATGCAGGTATTTTACTTCTTAGATTGGGTTAAGCACCTGCTAAGTGATACAAAATTGTTTCAAGCCTTCCTGAGGATTACTGTGACATGTGCAGTTGGTGTTGGTGCCATTGCACTGGGAGTTGGTACTGCATCTGGGTATATCTCTCCATGGACAGGTCGATTTTACTCTTTGCTTGATCCAACATATGCAAAGGATCACATCCCAATAATTGCATCTGTATCTGAGCATCAGCCAACAGCTTGGTCATCGTTCATGTTTGATTTTCATATCCTACTTTTCTTATTCCCTGCGGGTCTGTATTTCTGCTTCAAGCGGTTATCTGATGCCACAATATTCATAGTTATGTATGGTCTCACAAGCATGTATTTTGCTGGTGTCATGGTTCGGTTGATTCTTGTTGCTACACCTGCAATGTGCCTTATCAGTGCCATTGCAGTTTCTGCCACTATAAAGAATTTGACTCAGTTGGTAAGGACAAAGAGCAAGGTTGCTCATACTGGTTCTACCAAAGGTACCACTAGCGGAAAGGCGTCTTCTAAGGCTTCACTTGATCAATCTCTGCCTTTCCAAAGAAATGGAGCCATTGCACTGCTCATTGGTGCTTTTTATCTGCTCTGTAAATATGCTACCCACTGTACCTGGGTTACATCAGAGGCATACTCATCTCCATCAATTGTCTTGGCTGCAAGGGGTGCCTATGGCAACAGGGTCATCTTTGATGATTATCGTGAAGCGTACTTTTGGCTTCGGCAGAATACTCCTCCAGATGCCAAGGTGATGTCCTGGTGGGATTATGGGTACCAGATCACAGCCATGGGAAACAGAACTGTTATTGTTGACAACAACACCTGGAACAACACACACATTGCTACTGTTGGACGTGCAATGTCATCTTATGAAGATGAAGCATATGAGATAATGAGATCACTTGATGTGGATTATGTACTAGTTGTCTTTGGAGGTGTTACGGGTTATTCTTCTGATGATATTAACAAATTTTTGTGGATGGTGAGGATTGGTGGTGGAGTTTTCCCTGTTATCAAGGAACCTGATTATCTTGTTAATGGCGAGTATCGTGTTGACAAAGGTGCTGCACCAAAGATGTTGAATTGTCTCATGTACAAGCTATCTTATTATCGATTTGGAGAGCTGCAAACAGAATATGGCAAACCTCCTGGGTATGATCGCGCGAGGGGGGTTGAAATTGGAAATAAGGATATCAAACTCGAGTACTTGGAAGAGGCATTCACAACATCTAACTGGATTGTTAGGATATACAAAGTGAAACCACCCAACAATAGGTGGTGA 2226 0.4564 MVGKMEAVNGVKSGSNSTASTFQSAFFKPDLSLKSLKLKTKQQELLIRVSILTLVYILAFITRLFSVLRYESMIHEFDPYFNYRTTVFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAALIYSIIRFLRFAVHIREVCVLTAPFFASNTTIVAYFFGKELWDSGAGLVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLIPLYAMVLLITGRYSMRLYVAYNCMYILGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLMQVFYFLDWVKHLLSDTKLFQAFLRITVTCAVGVGAIALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAMCLISAIAVSATIKNLTQLVRTKSKVAHTGSTKGTTSGKASSKASLDQSLPFQRNGAIALLIGAFYLLCKYATHCTWVTSEAYSSPSIVLAARGAYGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELQTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKPPNNRW* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1075 741 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 543 695 - -
Vvi17g1075 741 Pfam Oligosaccharyl transferase STT3 subunit 50 527 IPR003674 GO:0004576|GO:0006486|GO:0016020
Vvi17g1075 741 Gene3D - 544 694 - -
Vvi17g1075 741 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 32 740 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1075 Vvi-Chr17 14645447 14654522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1075 14 740 Miscellaneous Gene Families AT1G34130 88.267 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1075 K07151 - vvi:100261650 1454.88