Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1072 ATGGCTTCCAGTTCCGGTTGCATCGTTCTTGTCGGAACCACCTCCGCTGTGGAATCATCCTCCGCCGGCTTCGGCGGTTGTTCTTCTCCTGTCGTTCTTCAATTTGATGTCGCTTTGGGTGGAAGCAATGGTGGCGGTTTGAGTAGGGTTTGTAGGGTTCGAATCGGGGTCCGGTCAGGGAGGCGATGGAGATCGCGGGCGATTCGTGAGTTGCATCAGCAGAAGAATCAGATTCATGGTGGCCCTGGTAATGCAGCTCCGACCACCACTGTTGAAATTCCGGTTTCTTGTTACCAGATTGTTGGTGTTCCTGATCAAGCAGAAAAAGATGAGATTGTTAAGTCAGTGATGGTACTGAAAAATGCTGAGGTTGAGGAAGGCTATACAATGGAGACCGTTATGTCACGCCAGGATCTTTTAATGGATGTGAGGGATAAACTTCTTTTTGAACCAGAATATGCCGGTAATGTGAAGGAGAAGATCCCACCTAAATCTGCCCTTCGAATTCCGTGGGCTTGGTTGCCTGGAGCTCTTTGCCTCCTTCAAGAGGTTGGAGAAGAGAAACTTGTGCTGGATATTGGCCGAAGAGCACTCCAGCATCCAGATGCTAAGCCATATATTCATGATTTGATTCTATCTATGGCACTAGCAGAGTGTGCAATTGCAAAGATTGGTTTCGAGAAGAACAAAGTATCTTATGGATTTGAAGCTCTTGCTCGTGCTCAGTGTCTTCTTAGGAGCAAAATGTCTCTTGGGAAAATGGCATTGTTATCTCAGATAGAAGAATCTTTGGAGGAGCTTGCACCTGCTTGCACATTGGAATTGCTAGGCATGCCTTACATACCTGAAAATACTGAACGGAGACGGGGAGCAATTGCAGCCCTGTGTGAATTGCTCAGGCAGGGTCTTGATGTAGAAACTTCATGCCAAGTCCAAGATTGGCCATGCTTCTTGAGCCGGGCACTCAACAGGCTCATGGTCATGGAAATAATTGATCTTCTTCCATGGGATAATTTAGCCGTTACACGGAAGAATAAAAAATCACTTGAATCTCAGAATCAAAGGGTTGTAATTGATTTTAATTGTTTCTACATGGTGTTAATCGCTCATATTGCTCTTGGGTTTTCAAGCAAACAAGCAGATTTGATCAACAAAGCAAAAGTGATATGCGAATGTTTGATAGCTTCAGATGGCGTTGATCTAAAATTTGAGGAAGCCTTTTGCTCATTCCTTCTTGGACAGGGTGATCAAGCAGAGGCTGTTGAAAGGCTTCGGCAGCTTGAATCTGGTTCAAATACTGCTTCACGAAATTCAATTCCAGGAAAGGAAATTAAAGATTCTTCCAATGCAAACCCATCATTGGAGTTGTGGTTGAAGGAGGCTGTGCTTAGTGTTTTTCCTGATACACGAGATTGTTCTCCGTCTTTGGCCAGTTTTTTTGGTGCTGAAAAAAGAACTCCTCGGAACAGGCAAACTAAAGGAGCCCTACTGACCGTTCCTAGTGTAAACCACAGACCAATATCTACTGCTCTTGCATCTGATCGGAGAGATATTGAGGAACCTCTTTCATATAAGAACTCTTCTCGACATCTTGGGTCAGCTGTAAAGCAGTTGGCTCCAGCTGATTTGCAAAGCCCTTTAATATTGGGCAAGAATGGTAATGAAAGTGATATTAACCCACCATCTGTTCAACTGAAAAGAAATCTTGGGGCATACCATAGTAAAGTGTGGGAAAATTGGTTGACCACTAGAGATGTAGTTGGAAGGGTAACCTTTGTAACAGTATTAGGGTGTGTTGTACTCATGACCTTTAAGCTCTCAGGTCTGAAGTTTGGGAGAATGAGGACTACATCTAGATTGGCCTCCCACAAATCAATTGTGGAGACAAGTTCTCTTGCCCGGACAACGGATCCTTCTCTAGATTGCAGAAGTAGCATCACTTACAAACTCAAGAAGCTGCTGGTGAAGGTTACAAAGCAACTCAGGAACCGCTCAGATGGTGGGAACCTGCAAAGTTCAGGCCTTGCTGCCAATCTATCATCCTCCATGGCAGCAGTGGACAGGAGTCCAATGCCTATGCAAGAAGCTGAGATGCTTGTCAAGCAATGGCAAGCCGCTAAAGCTCAAGCTCTTGGTCCTAGCCATCAGATTGATAGCCTGTCTGAAGTCCTTGATGATTCAATGCTGGTTCAGTGGCAAGCTCTAGCTGATGCAGCAAGACTTAAGTCTTGTTTCTGGAGATTTGTTTTACTGCAATTGTCTGTTATTCGGGCTGATATTTTATCAGATAGCACTGGCATTGAGATGGCAGAAATAGAGGCTCTCCTAGAAGAAGCAGCAGAGCTTGTTGATGAATCTCAGCCAAAGAACCCGAATTATTACAGCACATATAAAGTCCGTTATCTTCTGAGACGACAAGATGATGGTTCATGGAGATTTTGTGAAGGCGATATTCAAATACCATGCTGA 2469 0.4447 MASSSGCIVLVGTTSAVESSSAGFGGCSSPVVLQFDVALGGSNGGGLSRVCRVRIGVRSGRRWRSRAIRELHQQKNQIHGGPGNAAPTTTVEIPVSCYQIVGVPDQAEKDEIVKSVMVLKNAEVEEGYTMETVMSRQDLLMDVRDKLLFEPEYAGNVKEKIPPKSALRIPWAWLPGALCLLQEVGEEKLVLDIGRRALQHPDAKPYIHDLILSMALAECAIAKIGFEKNKVSYGFEALARAQCLLRSKMSLGKMALLSQIEESLEELAPACTLELLGMPYIPENTERRRGAIAALCELLRQGLDVETSCQVQDWPCFLSRALNRLMVMEIIDLLPWDNLAVTRKNKKSLESQNQRVVIDFNCFYMVLIAHIALGFSSKQADLINKAKVICECLIASDGVDLKFEEAFCSFLLGQGDQAEAVERLRQLESGSNTASRNSIPGKEIKDSSNANPSLELWLKEAVLSVFPDTRDCSPSLASFFGAEKRTPRNRQTKGALLTVPSVNHRPISTALASDRRDIEEPLSYKNSSRHLGSAVKQLAPADLQSPLILGKNGNESDINPPSVQLKRNLGAYHSKVWENWLTTRDVVGRVTFVTVLGCVVLMTFKLSGLKFGRMRTTSRLASHKSIVETSSLARTTDPSLDCRSSITYKLKKLLVKVTKQLRNRSDGGNLQSSGLAANLSSSMAAVDRSPMPMQEAEMLVKQWQAAKAQALGPSHQIDSLSEVLDDSMLVQWQALADAARLKSCFWRFVLLQLSVIRADILSDSTGIEMAEIEALLEEAAELVDESQPKNPNYYSTYKVRYLLRRQDDGSWRFCEGDIQIPC* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1072 822 MobiDBLite consensus disorder prediction 429 448 - -
Vvi17g1072 822 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 53 819 IPR044685 -
Vvi17g1072 822 Pfam ARC6-like, IMS domain 696 813 IPR025344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1072 Vvi-Chr17 14509292 14517801 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1072 - - vvi:100263251 1568.13