Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1071 ATGTACATTGTTGCCCCTGTCATGGCATTTTGCAATGCATATGGGCGTGGGCTCACTGATTGGTCCCTTGCATCCACCTATGGGAAGTTTGCCATCTTTACCATTGGGGCATGGGCTGGGGGTGCCCATGGTGGAGTTATAGCAGGTTTGGCAGCCTGTGGAGTGATGATGAATATCGTCTCAACAACTTCTGACCTAATGCAGGATTTCAAAACTGGTTATCTAATCGTAGCTTCACCTCGCTCAATGTTTGTGAGCCAATTGATTGGCACTGCAATGGGTTGTGTGATTGCCTCTTGTGTGTTTTGGCTCTTCTACAAGGCCTTTGATGACCTTGGGCAAGAAGGAAGTGAATGTCCTGCTCCTTATGCTTTGGTGTACCGTAACATGTCTATTATGAGGGTTGATGGCATTCCTTCTTACCAAAGAATTGTTTTCTTCTTTGTTGTGTGTTCTTCGCTGCAGCAATTCTTGTCAACTTGA 483 0.4576 MYIVAPVMAFCNAYGRGLTDWSLASTYGKFAIFTIGAWAGGAHGGVIAGLAACGVMMNIVSTTSDLMQDFKTGYLIVASPRSMFVSQLIGTAMGCVIASCVFWLFYKAFDDLGQEGSECPAPYALVYRNMSIMRVDGIPSYQRIVFFFVVCSSLQQFLST* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1071 160 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 1 140 IPR045035 GO:0035673
Vvi17g1071 160 Pfam OPT oligopeptide transporter protein 2 138 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1071 Vvi-Chr17 14485402 14485884 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1071 - - vvi:100252983 262.692