Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1068 ATGGATCACAAAAGAGATGAAGAGAATGGTTTGGATGGAAACTACAATTCAGTAGTGGAAACTGAACACATGAAGGAGAAGGAGAAGGAGAAGGAGAACCAAGAAGAAGAAGAAGAGATGTCGGTGGAGCGGCTTTTTGAAGGCAAGGAAGTACCATCATGGAGAGAACAGCTGACAGTGAGGGCCTTCGTGGTGAGGTTCGTGCTGTCAGTGCTCTTCACCTTCATAGTGATGAAACTCAACCTCACCACTGGCATCATCCCTTCCCTCAACGTCTCTGCGGGGCTCTTGGGTTTCTTCTTCGTCTCGGTTTGGACAAAGTTTCTTGACAAGTCTGGGCTCTTGAAGCAGCCCTTCACTCGACAAGAGAACACTGTTATTCAGACTTGCGTCGTGGCCTCCTCTGGCATCGCCTTCAGCGGAGGTTTTGGAAGCTACCTTTTCGGAATGAGTCAAGCTATTGCTAAACAATCTGAAAATGCTGGAGGCAACGAGGAATATAAGAACCCAGCAGTAGCATGGATGATTGGCTTTCTCTTTGTTGTTAGCTTTCTTGGCCTCTTTTCTGTCGTGCCTCTTCGAAAGATCATGATTGTAGACTTCAAATTGACATACCCAAGTGGTACTGCCACTGCTCATCTCATCAACAGTTTCCACACTCCTCAAGGAGCCAAGTTGGCAAAGAAACAAGTTAGAGTATTGGGCAAGTACTTCTCCTTCAGCTTCTTGTGGGGTTTCTTCCAATGGTTTTTTGCTGCTGGAGACGATTGCGGATTTGCAGGCTTCCCTACGTTTGGACTTAAAGCATACAAATACAAGTTTTTCTTTGATTTCTCGGCAACTTATGTTGGAGTGGGGATGATTTGTCCGCATATAGTAAACATATCGCTGCTGGTTGGAGGAATTCTTTCTTGGGGACTTATGTGGCCGCTTATAGAAACTAGAAAGGGTGATTGGTACCCTGCAGACCTTCCCTCAAGCAACATTCGTGGTCTTCAAGGTTACAAGATATTCATCGCCATTGCAACAATCCTAGGTGACGGGCTATATAACTTTTTCAAGGTACTGGGTCAAACTCTCTTGGGATTGTTTTACCAACTCCAATACAAAAATATGAGCGGTGTCCCACCCATTGAGGATCGCTCCTCTCCTAGGAGCTCATCTACTTGTTACAATGATACTCGTCGGACACAAGTTTTCCTCAAAGATCAAATTCCAACATCATTTGCTATTGGAGGGTACATTGCAATAGCTGCAATCTCCATGGCTACACTTCCTCACATATTTCCCCAACTCAAATGGTACTACATACTGGTTATCTATCTTGTTGCTCCTACCATGGCGTTTTGCAATGCATATGGGTGTGGGCTCACTGACTGGTCTCTTGCATCCACCTATGGGAAGCTTGCCATCTTTAGCATTGGAGCATGGGCTGGAGCTGCACATGGTGGAGTTATAGCAGGCCTGGCAGCCTGTGGAGTTATGATGAACATTGCATCAACCGCTTCCGACCTAATGCAGGATTTCAAGACTGGTTATCTAACCTTAGCTTCACCACGCTCAATGTTTGTGAGCCAATTCATTGGTACTGCAATGGGTTGTGTCATCTCCCCTTGTGTCTTTTGGCTGTTCTACAAGGCTTTTGATGACCTTGGGCAGAGTGGAAGTGAATACCCTGCTCCTTATGCTCTGGTCTTCCGCAACATGGCTGTTCTTGGGGTAGAGGGCATCTCCAATTTACCAAAGAACTGTTTCACGCTTTGTTGTGTGTTTTTTGGTGCAGCAATTCTCGTGAATTTGGTTAGGGATACTGTAGGTCGAAAGAGGGCGCAGTTCATTCCAATCCCAATGGCAATGGCAATACCATTTTATCTGGGCCCTTACTTCGCCATTGATATGTGTGTTGGTAGCTTAATATTATTTATATGGCAAAGGATAAACAAAGCTAAGGCAGAAGCTTTTGGACCTGCAGTAGCTTCTGGCTTGATTTGTGGAGACGGACTATGGACTTTGCCTAGTTCAATTCTTGCTTTAGCAGGAATAAAGCAACCAATTTGCATGAAGTTCCTGTCTAGGGCAACAAATGCCAGGGTTGATAAGTTCCTAGGGGCTTAA 2115 0.453 MDHKRDEENGLDGNYNSVVETEHMKEKEKEKENQEEEEEMSVERLFEGKEVPSWREQLTVRAFVVRFVLSVLFTFIVMKLNLTTGIIPSLNVSAGLLGFFFVSVWTKFLDKSGLLKQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSQAIAKQSENAGGNEEYKNPAVAWMIGFLFVVSFLGLFSVVPLRKIMIVDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVRVLGKYFSFSFLWGFFQWFFAAGDDCGFAGFPTFGLKAYKYKFFFDFSATYVGVGMICPHIVNISLLVGGILSWGLMWPLIETRKGDWYPADLPSSNIRGLQGYKIFIAIATILGDGLYNFFKVLGQTLLGLFYQLQYKNMSGVPPIEDRSSPRSSSTCYNDTRRTQVFLKDQIPTSFAIGGYIAIAAISMATLPHIFPQLKWYYILVIYLVAPTMAFCNAYGCGLTDWSLASTYGKLAIFSIGAWAGAAHGGVIAGLAACGVMMNIASTASDLMQDFKTGYLTLASPRSMFVSQFIGTAMGCVISPCVFWLFYKAFDDLGQSGSEYPAPYALVFRNMAVLGVEGISNLPKNCFTLCCVFFGAAILVNLVRDTVGRKRAQFIPIPMAMAIPFYLGPYFAIDMCVGSLILFIWQRINKAKAEAFGPAVASGLICGDGLWTLPSSILALAGIKQPICMKFLSRATNARVDKFLGA* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1068 704 Coils Coil 17 44 - -
Vvi17g1068 704 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 32 691 IPR045035 GO:0035673
Vvi17g1068 704 Pfam OPT oligopeptide transporter protein 57 676 IPR004813 GO:0035673
Vvi17g1068 704 MobiDBLite consensus disorder prediction 1 41 - -
Vvi17g1068 704 NCBIfam OPT family oligopeptide transporter 55 677 IPR004813 GO:0035673
Vvi17g1068 704 MobiDBLite consensus disorder prediction 19 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1068 Vvi-Chr17 14425971 14430643 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1068 - - vvi:100256406 1345.87