Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1066 ATGCTCTTCGTCAATTATATCCGAAAGGGCCTTCTCTTTAGCAAACCACCTGATGTGGATGATCCACAAAACTTCATGGCAACTCTCTTAGACAGGCTCAAGGATTCCCTCGCTCTCACACTCAACCATTTCTATCCACATGCAGGCCACCTTGTAACAAAGAAGGAGGATAGTTCCCCCTCTTACGTGGTATTTGTAGATTATAACAACAGTCCCGGAGCGCAATTCATCGACGCGGCTGCAGACATGACAATATCTGACATCCTTTCATCGATTTATATACCCCAAATTCTCCAATCATTCTTTGATCATGATAGGGAGAAGAATAGTTCCATATCATTATCACGCCCACCCATCCTCAAGTGTTGGATTCCTAATGGCTATGGTCCAATCATCAACTGTCCTTTCATTCACCATGATGAGTTCATCAACAGATTTGAAGCACCGGTACTCAAAGAGAAAATTTTCCACTTCTCATCAGAATCAATAGCAAAGCTCAAAGCAAAGGCAAATGCATAG 519 0.4258 MLFVNYIRKGLLFSKPPDVDDPQNFMATLLDRLKDSLALTLNHFYPHAGHLVTKKEDSSPSYVVFVDYNNSPGAQFIDAAADMTISDILSSIYIPQILQSFFDHDREKNSSISLSRPPILKCWIPNGYGPIINCPFIHHDEFINRFEAPVLKEKIFHFSSESIAKLKAKANA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1066 172 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 109 - -
Vvi17g1066 172 Gene3D - 1 121 IPR023213 -
Vvi17g1066 172 Pfam Transferase family 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1066 Vvi-Chr17 14377221 14377898 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1066 - - vvi:100852809 274.248