Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1061 ATGCCCATCATCGAAATTCAGGCCAAGCTCTCAGAAAGAGCATCGGAGCTGCTTGCTTTGCCCGATAATGGAGTTTCTAGATTATTCATTGACATCGATTGTGGACCTGGACTTTGTGGGGACGCGTTGTTTGAGAAAAGACACCAATGGATTGGTTTAGATATCTCAGAGTCAGGGTATATTGTTGCATCAATGTGTGACATTTCATCACTTGGAGACGTGGGTCAAGGTTTAGGACTTTGA 243 0.4403 MPIIEIQAKLSERASELLALPDNGVSRLFIDIDCGPGLCGDALFEKRHQWIGLDISESGYIVASMCDISSLGDVGQGLGL* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1061 80 Gene3D Vaccinia Virus protein VP39 2 78 IPR029063 -
Vvi17g1061 80 PANTHER METHYLTRANSFERASE-RELATED 3 80 IPR039769 GO:0016435|GO:0070476
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1061 Vvi-Chr17 14190898 14191842 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1061 K19306 - vvi:100264221 102.449