Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1059 ATGGCTTCCAAAGCTGTGGTGAACTCAGCTCTTGTGTTGAGAATCCTCACCCTCTTGCTTTTGGCTGCCTCGGTTGTGGTAATGGCCACCAACAATTTTAAGTTTAGTGATGGTACCAAAACCAGCTTTACGGATGTCATTGCTTACAGGTATGTGGCTGCTACGGGTGCGGTCGGATTTTTGTACACGGTGGCGCAAATACCCTTTGCTGTATATCATGCCTGTACTGAAAAGAGGCCCCTTCGCCCGGAGTTCGACTTCTATGGAGACAAGGTCATTAGCTTGCTTCTGGGCACCGGTGTGGGAGCTGGTTTTGCAGTCACTTTTGAGTTTAAAAGAAATTTGAATGATTTTGTACAAGGTGTGGAAGATTTGAGTGGTCAAGATTTAAGTGAATTCAAATCCAAGACGGAGAAATTCCTGGATAGGGCGACAATTGCTACAGGTCTGCTGTTCCTGGGATTCATTTGCATGGCCATTCTTTCAGTACTTTCATCCCTCAGTAGGAGTAGTGCTAAATCAAGCAAAGGCTTCTTTGGATGA 543 0.4549 MASKAVVNSALVLRILTLLLLAASVVVMATNNFKFSDGTKTSFTDVIAYRYVAATGAVGFLYTVAQIPFAVYHACTEKRPLRPEFDFYGDKVISLLLGTGVGAGFAVTFEFKRNLNDFVQGVEDLSGQDLSEFKSKTEKFLDRATIATGLLFLGFICMAILSVLSSLSRSSAKSSKGFFG* 181
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1059 180 PANTHER CASP-LIKE PROTEIN 4A4 8 167 - -
Vvi17g1059 180 Pfam Casparian strip membrane protein domain 9 157 IPR006702 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g1059 Vvi-Chr17 14140516 14141425 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1059 - - vri:117904008 285.034