Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1055 ATGGCTTTCCAGGCGAAGAAACTCATCAATGATCCAAATGATGTGGTAACGGAGTTCATCGAGGGTCTTGTGGAAACTTATCCTGGATTGCAGTACCTGGATGGTTTTCCTCAGGTTAAAGTGGTCTTACGTGCTGATGTTTCGGGTGCAACGTACAACAAAGTTGCAGTTATATCAGGAGGAGGAAGTGGTCATGAACCTGCCCATGCTGGTTTTGTGGGGGAAGGGATGCTGACAGCAGCTATATGTGGAGATGTTTTTGCCTCCCCATCAGTTGATTCAATTCTAGCTGGTATTCGAGCTGTTACTGGTCCCATGGGTGCTCTTCTGATTGTCAAGAATTATACTGGCGATCGGTTAAATTTTGGTTTGGCCGCCGAGGAAGCAAAATCTGAGGGATACAAAGTTGAGATTGTCATTGTTGGTGATGATTGTGCCTTACCACCACCTCGAGGCATAGCAGGACGAAGAGGCTTGGCTGGGACTATTCTTGTTCATAAGGTTGCTGGAGCTGCTGCTGCTGCTGGCCTTTCGCTTGCTGATGTTGCTGCAGAAGCAAGACATGCATCTGAAATGGTTGGAACGATGGGTGTTGCATTAACTGTATGCACACTGCCAGGTCAGGTCACATCTGATCGTCTGGGCCCAGGAAAGATGGAACTTGGTCTTGGGATTCACGGGGAACCTGGCGCAGCTGTTGCTGACCTTCAGCCTGTGGATGTTGTGGTTTCTCATGTTCTTAAGCAGATTTTATTACCGGAAACTAACTATGTTCCGATCACTCGAGGAAACAGAGTGGTGCTCCTCATCAATGGCTTAGGTGCCACCCCTGCAATGGAACTGATGATTGCAGCAGGAAAAGCAGTCCCTAGATTGCAGCTGGAACATGGACTAGCTGTTGATAGAGTGTATACAGGATCATTTATGACTTCTCTTGATATGGCAGGATTTTCAATTTCTGTCATGAAGGCAGATCAATCAATTTTGCAACGTTTGGATGCTGCAACTAAGGCTCCACATTGGCCTGTTGGTGTTGATGGTAATCGCCCAGCTGCCAAGATTCCTGTTCCAATGCCACCTTGTCGTTCAACAAAGAGTGATGAGTCACTAAGCCGGCCTCAACTGCTGAATGAACAAGGCTGTATTCTTGAGGTGGCTATTGAAGCAGCAGCAAACTCAGTTATCAATCTTAAGGACTGGTTAAATGAATGGGATAGCAAAGCAGGTGATGGCGACTGTGGGTCTACCATGTTTAGAGGTGCAACAGCTATTTTGGAGGACATGAAAAAATTTTATCCTCTGAATGACCCTGCAGAAACAGTAAATGAAATTGGATCTTCTATCAGAAGAGCTATGGGCGGAACGAGTGGGATCATATATGATATATTCTGTAAGGCGGCATATGCACAGCTAAAAGCAAACACCAAAACAGTTGTTACAGCAAAACAATGGAAAGATGCACTTGAAGCTTCCATTGCTGCTGTCAGTAAATATGGAGGGGCTAGTGCAGGCTATCGCACAATGTTGGATGCTCTTATTCCAGCATTAACCGTTCTTCAAGAGAGGTTAGATGCTGAAGATGACCCTGTCACTGCTTTTGTTCTTTCATCCGAAGCAGCATTGGATGGGGCTGAGTCCACCAAACACATGCAAGCACAAGCTGGCCGCTCAAGCTATATCTCCGGAGAGATACTAGCATCAGTTCCAGACCCGGGTGCCATGGCTGCAGCGTCTTGGTACCGAGCAGCGGCCTTAGCTGTCAAGGACAAATGCATGGCTTCATGA 1785 0.4678 MAFQAKKLINDPNDVVTEFIEGLVETYPGLQYLDGFPQVKVVLRADVSGATYNKVAVISGGGSGHEPAHAGFVGEGMLTAAICGDVFASPSVDSILAGIRAVTGPMGALLIVKNYTGDRLNFGLAAEEAKSEGYKVEIVIVGDDCALPPPRGIAGRRGLAGTILVHKVAGAAAAAGLSLADVAAEARHASEMVGTMGVALTVCTLPGQVTSDRLGPGKMELGLGIHGEPGAAVADLQPVDVVVSHVLKQILLPETNYVPITRGNRVVLLINGLGATPAMELMIAAGKAVPRLQLEHGLAVDRVYTGSFMTSLDMAGFSISVMKADQSILQRLDAATKAPHWPVGVDGNRPAAKIPVPMPPCRSTKSDESLSRPQLLNEQGCILEVAIEAAANSVINLKDWLNEWDSKAGDGDCGSTMFRGATAILEDMKKFYPLNDPAETVNEIGSSIRRAMGGTSGIIYDIFCKAAYAQLKANTKTVVTAKQWKDALEASIAAVSKYGGASAGYRTMLDALIPALTVLQERLDAEDDPVTAFVLSSEAALDGAESTKHMQAQAGRSSYISGEILASVPDPGAMAAASWYRAAALAVKDKCMAS* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1055 594 FunFam Dihydroxyacetone kinase 1 193 345 - -
Vvi17g1055 594 PANTHER TRIOKINASE/FMN CYCLASE 1 588 - -
Vvi17g1055 594 SUPERFAMILY DAK1/DegV-like 6 343 - -
Vvi17g1055 594 SMART Dak2_2 407 585 IPR004007 GO:0004371|GO:0006071
Vvi17g1055 594 Gene3D Dihydroxyacetone kinase; domain 1 16 191 - -
Vvi17g1055 594 FunFam Dihydroxyacetone kinase, DhaK subunit 16 191 - -
Vvi17g1055 594 FunFam Dihydroxyacetone kinase, L subunit 378 588 - -
Vvi17g1055 594 SUPERFAMILY DhaL-like 374 583 IPR036117 GO:0004371|GO:0006071
Vvi17g1055 594 ProSiteProfiles DhaK domain profile. 11 341 IPR004006 GO:0004371|GO:0006071
Vvi17g1055 594 MobiDBLite consensus disorder prediction 346 370 - -
Vvi17g1055 594 Gene3D Dihydroxyacetone kinase; domain 2 194 345 - -
Vvi17g1055 594 NCBIfam glycerone kinase 6 583 IPR012734 GO:0004371|GO:0005524|GO:0006071
Vvi17g1055 594 ProSiteProfiles DhaL domain profile. 381 585 IPR004007 GO:0004371|GO:0006071
Vvi17g1055 594 Gene3D - 382 589 IPR036117 GO:0004371|GO:0006071
Vvi17g1055 594 Pfam DAK2 domain 408 583 IPR004007 GO:0004371|GO:0006071
Vvi17g1055 594 Pfam Dak1 domain 21 339 IPR004006 GO:0004371|GO:0006071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1055 - - vvi:100245056 1144.8