Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1049 ATGGATCTAGCAATAAACATCCATAGAATCCGAAAAGCTTACCAAGTATTAGCCATTCAAGGTGATTTCAAGGGATTTAAGCCTTTTCCTGTGGCTGCTGAAGCTGCTCCTGACCCAGTACTTGACATCGAGGGAAAGAAGCTCCGGTCCGAGGTTGATTGCTACATCCTGCCAGTCATCCGTAGGAGAGGCGGTGGTGGCCTCACCCTGGCCAGCACTGGGAAAGAGACTTGCCCTCTTGATGTTGTCCAAGAACAACATGAGGTATCAAACGGTCTCCCATTGATGTTTATACCAGTGAACCCCAAGAAAGGCGTGATTCGTGTGTCTACTGATCATAACATCGAGTTCTCTGCTGCCACAATCTGCATACAATCCACTGTGTGGAAGCTTGAGTATGATGAATCATCCGGACAACAGTTTGTCACAACTGGTGGGGTTGAAGGGAACCCGGGGCGTGGAACTTTGAGCAACTGGTTCAAGATCGAGAAATATGAAGATGACAACAATCTGGTCTTCTGTCCAACAGTGTGTGATTTCTGTAAGCCTGTTTGTGGGGACATTGTCATTTATATCCAGGATGGATACAGGCGCCTGGCTCTGAGTGATGTGCCCTTCAAGAAGATTAATATTTACAATGAAGACTACGCTTGTGCTACTCTTCTTCCTCCTCTTTTCCCTACTGCCCAAGCTGCACCTGATCCAGTGCTTGACACTGATATAAAGAAGCTCCAATCTGGGGTGAATTACTACACCCTGCCAGTTATCCGTGGTCGGGAATGA 783 0.4725 MDLAINIHRIRKAYQVLAIQGDFKGFKPFPVAAEAAPDPVLDIEGKKLRSEVDCYILPVIRRRGGGGLTLASTGKETCPLDVVQEQHEVSNGLPLMFIPVNPKKGVIRVSTDHNIEFSAATICIQSTVWKLEYDESSGQQFVTTGGVEGNPGRGTLSNWFKIEKYEDDNNLVFCPTVCDFCKPVCGDIVIYIQDGYRRLALSDVPFKKINIYNEDYACATLLPPLFPTAQAAPDPVLDTDIKKLQSGVNYYTLPVIRGRE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1049 260 SMART kul_2 39 210 IPR002160 GO:0004866
Vvi17g1049 260 Pfam Trypsin and protease inhibitor 40 207 IPR002160 GO:0004866
Vvi17g1049 260 Gene3D - 34 209 - -
Vvi17g1049 260 SUPERFAMILY STI-like 36 206 IPR011065 -
Vvi17g1049 260 CDD STI 39 208 IPR002160 GO:0004866
Vvi17g1049 260 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 159 178 IPR002160 GO:0004866
Vvi17g1049 260 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 78 98 IPR002160 GO:0004866
Vvi17g1049 260 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 182 211 IPR002160 GO:0004866
Vvi17g1049 260 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 39 68 IPR002160 GO:0004866
Vvi17g1049 260 PANTHER KUNITZ TRYPSIN INHIBITOR 2 226 259 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1049 Vvi-Chr17 13780794 13793360 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1049 - - vvi:100854356 377.867