Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1048 ATGACCGATCATAAGATTAAGTTTTCTACTACCACGACTTGTGTACAATCCACAGTGTGGAAGCTCAATGAGTATGACCAATCTACTAGAAAATTATTTGTTACAACTGGTGGGTTTGAAAGGAACCCAAGTATCCAAAATTTGAGTAATTGGTTTAGGATTGAGAAGTATGAGGATGATTACAAATTGGTGTTCTATCCAACAACTTGTGATTTTTGTAGGCCTATTTGTGGGGACATCGACATTTATATTCAGGATGGATACAAGCGTTTGGCTCTGAGTGATGTGCCACTCAAGGTTATGTTTAAGAGGGCTTTAAGTTGGTTGATTTCCTTCAATGTAATAAAATATAGTAGATAA 360 0.3611 MTDHKIKFSTTTTCVQSTVWKLNEYDQSTRKLFVTTGGFERNPSIQNLSNWFRIEKYEDDYKLVFYPTTCDFCRPICGDIDIYIQDGYKRLALSDVPLKVMFKRALSWLISFNVIKYSR* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1048 119 PANTHER KUNITZ TRYPSIN INHIBITOR 2 2 105 IPR002160 GO:0004866
Vvi17g1048 119 Gene3D - 1 105 - -
Vvi17g1048 119 Pfam Trypsin and protease inhibitor 2 104 IPR002160 GO:0004866
Vvi17g1048 119 SMART kul_2 1 106 IPR002160 GO:0004866
Vvi17g1048 119 SUPERFAMILY STI-like 2 105 IPR011065 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1048 Vvi-Chr17 13764390 13764749 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1048 - - vvi:100246827 166.777