Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1043 ATGAAGACCACATCGTTGCTTTTCTCCTTGCTGCTCATTGCCCTTGCTGTGAAGCCTTTTTCTGTGGCTGCTGAATCTGCTCCTGACCCTGTGCTTGATACTGAGGGAAAGAAGCTCCGGTCCGGAGTTGATTACTACATCCTGCCAGTTTTCCGTGGGAGAGGCGGTGGCCTCACCCTGGCCAGCACTGGGAACGAGACCTGCCCTCTTGATGTTGTCCAAGAACAGCAAGAGGTATCAAACGGTCTCCCATTGACGTTTACGCCGGTGAACCCCAAAAAAGGCGTGATTCGTGTGTCCACCGATCATAACATCAAGTTCTCTGCTTCCACAATCTGTGTACAATCCACTTTGTGGAAGCTTGAGTATGATGAATCGTCCGGACAACGGTTTGTCACAACTGGTGGGGTGGAAGGCAATCCAGGTCGTGAAACTCTGGATAATTGGTTCAAGATTGAGAAATATGAAGATGACTACAAGCTGGTCTTCTGTCCAACAGTGTGTGATTTCTGCAAGCCTGTTTGTGGGGACATCGGCATTTATATCCAGAATGAATACAGGCGTTTGGCTCTGAGTGATGTGCCCTTCAAGGTTATGTTCAAGAAGGCTTGA 612 0.4886 MKTTSLLFSLLLIALAVKPFSVAAESAPDPVLDTEGKKLRSGVDYYILPVFRGRGGGLTLASTGNETCPLDVVQEQQEVSNGLPLTFTPVNPKKGVIRVSTDHNIKFSASTICVQSTLWKLEYDESSGQRFVTTGGVEGNPGRETLDNWFKIEKYEDDYKLVFCPTVCDFCKPVCGDIGIYIQNEYRRLALSDVPFKVMFKKA* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1043 203 CDD STI 30 202 IPR002160 GO:0004866
Vvi17g1043 203 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 172 201 IPR002160 GO:0004866
Vvi17g1043 203 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 68 88 IPR002160 GO:0004866
Vvi17g1043 203 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 149 168 IPR002160 GO:0004866
Vvi17g1043 203 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 30 59 IPR002160 GO:0004866
Vvi17g1043 203 SUPERFAMILY STI-like 27 203 IPR011065 -
Vvi17g1043 203 PANTHER KUNITZ TRYPSIN INHIBITOR 2 4 203 IPR002160 GO:0004866
Vvi17g1043 203 SMART kul_2 30 203 IPR002160 GO:0004866
Vvi17g1043 203 Gene3D - 25 203 - -
Vvi17g1043 203 Pfam Trypsin and protease inhibitor 31 202 IPR002160 GO:0004866
Vvi17g1043 203 ProSitePatterns Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 31 47 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1043 Vvi-Chr17 13578093 13588412 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1043 - - vvi:100255885 404.06