Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1042 ATGAAGACTTCATCCCTGCTACTATTCTCCTTGTTTCTCATTGCCCTTGCTTTCAACCCTCTCCCTGGGGCTGCCGAAGCTGCACCTGATCCAGTGCTTGACATTGAGGGAAAGCAGCTCCGATCTGGGGTTGATTACTACATCCTGCCGGTCATCCGTGGGAGAGGCGGCGGCCTCACCGTGGCGAGCGTCAGGAACAAGACCTGCCCGCTGGATGTGGTCCAAGACAAGCTGGAGGTATCACATGGTCTCCCATTGACGTTTACTCCAGTGAACCCCAAGCAAGATGTGATCCGAGTGTCCACTGATCATAACATCAAGTTCTCTGCTGCCACAATCTGTGCACAATCCACTGTGTGGAAGCTTGAGTATGATGAATCAACGGGACAACGGTTTATCACAACAGGGGGGGTTGAAGGGAACCCGGGGCGTGGAACTTTGAGCAACTGGTTCAAGATTGAGAAATATGGAGATGATTACAAGCTGGTCTTCTGTCCAACAGTGTGCAACTTCTGCAAGGTGATTTGCAGAGACGTGGGCGTTTATATCCAGAAGGGATACAGGCGTTTGGCTTTAACAACTGATGCGCCATTCAGGGTTATGTTCAAGAAGGCTTGA 618 0.5097 MKTSSLLLFSLFLIALAFNPLPGAAEAAPDPVLDIEGKQLRSGVDYYILPVIRGRGGGLTVASVRNKTCPLDVVQDKLEVSHGLPLTFTPVNPKQDVIRVSTDHNIKFSAATICAQSTVWKLEYDESTGQRFITTGGVEGNPGRGTLSNWFKIEKYGDDYKLVFCPTVCNFCKVICRDVGVYIQKGYRRLALTTDAPFRVMFKKA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1042 205 PANTHER KUNITZ TRYPSIN INHIBITOR 2 6 205 IPR002160 GO:0004866
Vvi17g1042 205 SMART kul_2 31 205 IPR002160 GO:0004866
Vvi17g1042 205 ProSitePatterns Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 32 48 IPR002160 GO:0004866
Vvi17g1042 205 Pfam Trypsin and protease inhibitor 32 204 IPR002160 GO:0004866
Vvi17g1042 205 Gene3D - 26 205 - -
Vvi17g1042 205 SUPERFAMILY STI-like 28 205 IPR011065 -
Vvi17g1042 205 CDD STI 31 204 IPR002160 GO:0004866
Vvi17g1042 205 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 31 60 IPR002160 GO:0004866
Vvi17g1042 205 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 173 202 IPR002160 GO:0004866
Vvi17g1042 205 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 69 89 IPR002160 GO:0004866
Vvi17g1042 205 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 150 169 IPR002160 GO:0004866
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1042 Vvi-Chr17 13472940 13473557 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1042 - - vvi:100242398 410.994