Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1041 ATGAGGGAGCAGTTCTCAGATGAGTGTGGTGGAAGTCCATTCATGAGCCCATTAGGGACGACTCCAGAGAGAAGACCCTCTTCTCTATCTGAGCCTGCCAGTCGTATCCAAAGTCCCTCTTCTTCAGATGACTCTTCCAACTTCATCAAAACAAAAAATAGAAATTCGGTAGTGGGTCGCATGAACAAGTTGGGGAAGAAGACACACAGTTTTGCTTTCAGGGTTCGGGAACATGTGAGACTGGGGCCAAAGCTATCAGAAACAGTGAAGGGGAAGCTGAGTTTGGGGGCAAGAATCATACAAGAAGGTGGGAGGGAGAAGATATTCAAGCATATATTCAGTGTGAACGAAGGAGAGGAGCTGTTGAAGGCTTCACAGTGCTACTTGTCAACAACTGCTGGTCCAATTGCTGGTCTCCTCTTTATCTCCACTGAAAAGGTTGCTTTTTGCAGTGAAAGATCCATCTCTTTAACTTCTCCATCTGGGGAAATTGTTAGATCACCCTACAAGGTTTTGATACCAGTGAGAAAGATAAAAAGAGCAAACCAAAGTGAAAATGTGAACAAGCCAGCACAGAAGTACATAGAAATAGTTACTACGGATGGTTTTGAGTTTTGGTTTATGGGATTTTTGAGGTATGAGAAAGCTTTCAAGAATCTTGAGAAGGCCATTTCTATGTACAACTAA 687 0.4309 MREQFSDECGGSPFMSPLGTTPERRPSSLSEPASRIQSPSSSDDSSNFIKTKNRNSVVGRMNKLGKKTHSFAFRVREHVRLGPKLSETVKGKLSLGARIIQEGGREKIFKHIFSVNEGEELLKASQCYLSTTAGPIAGLLFISTEKVAFCSERSISLTSPSGEIVRSPYKVLIPVRKIKRANQSENVNKPAQKYIEIVTTDGFEFWFMGFLRYEKAFKNLEKAISMYN* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1041 228 MobiDBLite consensus disorder prediction 21 52 - -
Vvi17g1041 228 Gene3D - 105 225 IPR011993 -
Vvi17g1041 228 MobiDBLite consensus disorder prediction 1 52 - -
Vvi17g1041 228 Pfam Sterol methyltransferase C-terminal 59 109 IPR013705 GO:0006694|GO:0008168
Vvi17g1041 228 PANTHER GEM-LIKE PROTEIN 2 47 226 IPR037848 -
Vvi17g1041 228 Pfam GRAM domain 108 225 IPR004182 -
Vvi17g1041 228 SMART gram2001c 107 185 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1041 Vvi-Chr17 13469820 13471356 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1041 - - vvi:100264685 428.713