Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1038 ATGGAGGATGGAGCTGAAGAACAGCTTTTTCATGAAGAGAGCTGTCAGGTAGAGATGACGGTGGAGGAGGTGATAGAAAGGCACGTGGGCTCGCTGGGATTATCCCAGCTCGTGCAGGTGGTGCTGGTGTCGTTGGCCTGGATGTTTGATTCACAGAACACTTTGGTAACCATATTCACAGACGCACAGCCATCTGAATGGAGATGCAAAGCAGAAGCATGTAGCGATGGTGGTGGTGGTGGTGGTGTTTGTGGGCTTTTGCCGGGCACTTGGGAGTGGGTGGCTGGGCATGGAAGCACCACTATTGCCGAGTGGGGTCTCATCTGTAACCACAAGTTTCTCGCTGCCATACCCACTTCCTTGTTCTTCCTCGGCTCTCTCCTCGGATCCGGTGTATCTGGGCGGTTGGCAGACGCATACTTGGGAAGGAAGAAGACGGTGGTGATCTCATGCATCCTAACCTCTGCAACTGCATTCCTCACTTCCCTCTCTCCCAACCTCTGCATCTATGCACTCCTCCGCTTCGCTAACGGCTTCGCCAGGTCCGGCATCGGCATCTGCTGTCTCGTCCTCTCCACCGAAGTAGTTGGCCACAAATGGCGTGGCCAAGTCGGCCAATACGGCTTCTTCTTCTTCACCACTGGCTTCCTCTCCCTTCCCTTGATCGCCTATCCCTCAAGAAGCTCTTGGAGAAATGTATATAGAATCATCTCCCTCTTCCCTGTCTCTTACTCTCTCCTCATACTCCCCTTCGTGTCAGAATCGCCACGGTGGTTGCTTGTCAGGGGGAGAGGCCAAGAGGCAGTTGATGTGTTGAACAAGTTCGCCAGACTCAATGGGAAGAAGCTGCCCCAGAATCTGAGACTTGCGAACCCGGGTGGAGTGGATGAAGGTGATGCCATCAAGAGGAAGAAGAGTCTGTGGAGCACAGGGTGGGCAGCTAAAAGAATGGTAATGGTGATGTTAGCTGGTTTTGGGGTTGGGTTTGTTTACTACGGTGTGCAACTCAATGTTGAAAACCTTAGCTTCAACCTCTACTTGACTGTTGCCATCAATGCAATCATGGAGATTCCTGCTGTTCTCATCGGCTCCGTGCTCTTGAGTTTCACAAACCGCCGTCTTCTTTTCTCCAGCTCCATTTGCTTAGCTGGAGTTGCATGCATTGTGTGCATCTTCTTCTCCGAAGCAGGAGGGCGTCGGAGGAGAGAAGAATCCAGGGGGAGTTGGCCCCAATTGAGCATTGAAGCCATTGGGTTCATGGCTGCTTCCACAGCATTTGATGTGCTATATATCTACTGCGTAGAGCTTTTTCCCACCAATGTGAGGAACTTTGCAGTGTCAATGCTGCGACAATCACTGATGTTAGGAGCTTCGATTGCGCCACTGCTGGTTGTTGTTGGGCGGTTGAGTCCGGCTCGATCATTTCTTATATTTGGAATTCTTTCCATGGTTAGTGGACTATTGGGAATGTCTCTTCCTGAGACCAAGAATGCACCTCTCTACGAGACTCTGGAGCAGCAAGAAGAAGAGGAGAAACTCACTTGCCTAGCATCAGATGATTCAGGTTTGGAACTTGGCAAGTAG 1584 0.512 MEDGAEEQLFHEESCQVEMTVEEVIERHVGSLGLSQLVQVVLVSLAWMFDSQNTLVTIFTDAQPSEWRCKAEACSDGGGGGGVCGLLPGTWEWVAGHGSTTIAEWGLICNHKFLAAIPTSLFFLGSLLGSGVSGRLADAYLGRKKTVVISCILTSATAFLTSLSPNLCIYALLRFANGFARSGIGICCLVLSTEVVGHKWRGQVGQYGFFFFTTGFLSLPLIAYPSRSSWRNVYRIISLFPVSYSLLILPFVSESPRWLLVRGRGQEAVDVLNKFARLNGKKLPQNLRLANPGGVDEGDAIKRKKSLWSTGWAAKRMVMVMLAGFGVGFVYYGVQLNVENLSFNLYLTVAINAIMEIPAVLIGSVLLSFTNRRLLFSSSICLAGVACIVCIFFSEAGGRRRREESRGSWPQLSIEAIGFMAASTAFDVLYIYCVELFPTNVRNFAVSMLRQSLMLGASIAPLLVVVGRLSPARSFLIFGILSMVSGLLGMSLPETKNAPLYETLEQQEEEEKLTCLASDDSGLELGK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1038 527 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 35 505 - -
Vvi17g1038 527 Pfam Sugar (and other) transporter 114 502 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vvi17g1038 527 Gene3D MFS general substrate transporter like domains 93 506 IPR036259 -
Vvi17g1038 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 497 IPR020846 GO:0022857
Vvi17g1038 527 SUPERFAMILY MFS general substrate transporter 114 508 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1038 Vvi-Chr17 13347003 13350001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1038 2 513 Organic Solute Cotransporters AT1G73220 58.203 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1038 - - vvi:100268046 946.806