Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1017 ATGCCTCCTCTGGATTTCAAAGATTTCCAAGAAAAGCTCTCAACCCATTTCAGGCCTTTTCACCGCTCCTTCCAGTTCTGGGTGCGAGCGGTTGATATCTACACTGGCTACAAGGTGTTTCAACTTCGGGTGAGTTTCGTGAAGGATGTGAAGAAGCAGGAGGAAATGTGGGAGGTGCAACACGAACTTGCAGCTGAGAAGATATATGCTACGTGCGCTGACCTTGGTGGGTTTTTTCTTAAGATTGCCCAAATTATTGGAAAGCCTGACTTGGCCCCAGCTGCATGGGTTAGAAGGCTTGTTACACTGTGTGATCGAGCTCCTGCAACCCCATTTGATGCAATCCAACCTGTGCTGGAGAAAGAGTTGGGTCAAAGTATTGGTGAAATATTTGAAAGATTTGATGTGGATCCAATTGGTTCTGCTTCAATTGCACAGGTTCACCGAGCAAGATTGAGAGGTGATAAAAATGATGTTGTTGTCAAGGTGCAACATCCTGGAGTTCAGGATCTTATGATGACTGATATCCGTAATTTGCAAGCTTTTGCTTTATACATGCAGAAGACAGATATTAAATTTGACCTTTACTCTGTGACTAAAGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATTAGGGAGGCTGATGCAATGGAAAGAATAAAACGTTTTTTGTATGAGAATAACAAAAAGCGTCCTGTTTTGGTGCCACGGGTAATACGTGATATGGTGACTAGGAGGGTCTTAGTGATGGAATATATTGATGGAATTCCTATCCTGAACCTCGGTGATGAAATAGCAAAAAGGGGCATTAATCCGGGTGGTAAGCTCGCAGCAGCAGCAAAGCAGAAGATCCTTGAAAGTTTGACTATAGCATATGGGCAAATGATACTGAAGAGTGGTTTCTTCCATGCAGATCCCCATCCTGGAAATATTCTGATCTGCAAAGGTTCAGAGGCAAGTGGGCAATATAAACTTGTTTTGACCTCCCCAGACAAGTTGAGGATTGGATATGCTAATTTGATTCTGGCTATTGCTGATAATGACCCAGTAAAGGCATCAGAAAGCTACAGGGAGCTTGGCATAGAGACCTTAAGCAATTGTAAGGATGAACAAAATGAATTATTCAAGTTGGCCCAGACAATGTTTGATACAAAACTACCACCTGGAGTAGTGATGCTACAACCTTTTGCAGAAGATTCTTCAATAAAAAAAGTTGGTGTTCAGGCTTTTCCAGAGGAACTGTTTTCTATCCTTCGTACGGTTCATCTATTGAGAGGACTTAGTGTTGGCCTTGGAATAAACTACTCATGTGCAGACCAGTGGAGACCCATTGCAGAAGAAGCCTTGGTTCGTGCAGGTAGATTAAAAGATAAGGATGTCAAGAGCAGAGCACGTCAAAGCAGCTTCTTCAGAAGAATATTTTCGCAACAGTGA 1440 0.4229 MPPLDFKDFQEKLSTHFRPFHRSFQFWVRAVDIYTGYKVFQLRVSFVKDVKKQEEMWEVQHELAAEKIYATCADLGGFFLKIAQIIGKPDLAPAAWVRRLVTLCDRAPATPFDAIQPVLEKELGQSIGEIFERFDVDPIGSASIAQVHRARLRGDKNDVVVKVQHPGVQDLMMTDIRNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFIREADAMERIKRFLYENNKKRPVLVPRVIRDMVTRRVLVMEYIDGIPILNLGDEIAKRGINPGGKLAAAAKQKILESLTIAYGQMILKSGFFHADPHPGNILICKGSEASGQYKLVLTSPDKLRIGYANLILAIADNDPVKASESYRELGIETLSNCKDEQNELFKLAQTMFDTKLPPGVVMLQPFAEDSSIKKVGVQAFPEELFSILRTVHLLRGLSVGLGINYSCADQWRPIAEEALVRAGRLKDKDVKSRARQSSFFRRIFSQQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1017 479 PANTHER ABC1 FAMILY PROTEIN 22 451 - -
Vvi17g1017 479 CDD ABC1_ADCK3-like 103 357 - -
Vvi17g1017 479 Pfam ABC1 atypical kinase-like domain 103 353 IPR004147 -
Vvi17g1017 479 SUPERFAMILY Protein kinase-like (PK-like) 105 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1017 Vvi-Chr17 12508596 12515885 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1017 K08869 - vvi:100253088 926.391