Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1015 ATGGTGGCACATCTACAAGCTCAGAACAAGAGGATGACTAAACATGAGATTGAAGAGATAAAGGAGATCTTTGAATTTACTACGCCATGTTTTTCAAATACCTTCCCTCGCCATGAACGATCAAAGAGGCGCATAAATTGCAAGAACATAATCATCCGTAAAGAAAAGAAGAAGCTTGACACCGCTGCATTTGAATGGTACTTCAGGAACTTATGGAAGAGCTTCTCTGATGATAAAAAGAGTTCATTTGGCTACCTTGATTGTTTATGGTTTTCATTCTACCTGAAAACATCTTCTAGAGAAAAAGTGTTGAATTGGATAAAAAAGAAGAGAATTTTTTCAAGGAAATATGTTTTTGTTCCCATTGTTTGTTGGAATCACTGGAGCCTCCTGATCTTGTGCCATTTTGGTGAGAGTTTGGAGTCAAAAATTAGGGCGCCATGCATGTTATTGCTGGATTCACTTCAAATGGCAAACCCAAAGCGCCTTGAGCCAAATATACGGAAATTTGTATTTGACATTTATAAAGAAGAAGGCAGGCCAGAGAGCAAACAGTTGATTTCTAAAATTCCCTTGTTGGTGCCCAAGGTGCCACAGCAGAGGAATGGTGAGGAATGTGGCAATTTTGTTCTGTACTTCATCAATTTGTTTATGGATGGTGCTCCAGAAAATTTTAGTGTTTCCGAGGGCTACCCTTATTTTATGAAGAAGAACTGGTTTGGTCCTGAAGCCTTGGAACATTTCTTCAGGAAACTCGATTCCATTCCAAAGCCTGATCTGTGA 783 0.3921 MVAHLQAQNKRMTKHEIEEIKEIFEFTTPCFSNTFPRHERSKRRINCKNIIIRKEKKKLDTAAFEWYFRNLWKSFSDDKKSSFGYLDCLWFSFYLKTSSREKVLNWIKKKRIFSRKYVFVPIVCWNHWSLLILCHFGESLESKIRAPCMLLLDSLQMANPKRLEPNIRKFVFDIYKEEGRPESKQLISKIPLLVPKVPQQRNGEECGNFVLYFINLFMDGAPENFSVSEGYPYFMKKNWFGPEALEHFFRKLDSIPKPDL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1015 260 Gene3D - 55 247 - -
Vvi17g1015 260 SUPERFAMILY Cysteine proteinases 13 239 IPR038765 -
Vvi17g1015 260 ProSiteProfiles Ubiquitin-like protease family profile. 43 217 IPR003653 GO:0006508|GO:0008234
Vvi17g1015 260 Gene3D - 83 194 - -
Vvi17g1015 260 Pfam Ulp1 protease family, C-terminal catalytic domain 97 228 IPR003653 GO:0006508|GO:0008234
Vvi17g1015 260 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 38 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1015 Vvi-Chr17 12495118 12496962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1015 - - vvi:100251251 519.235