Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1014 ATGGAGAACGGACCAAAGAGGCGCAGAAGGGAACTGGAGCCCACAGTTCTTCACAAGGTGGGAGATGTAATCTCCGCCATTAACGAAGCCAAACACGTCGACCAACTCATTTGTGCTCTTCACTCCCTTGCTGTCCGCCTTTTCCCTCTCGACTCATCTGCTTTCTCAGGTCGGAAAATTTCCTATTCCTTCTGTAGCATCGATGAGCAGTACAGAGATCAAGTCCTTAGGACTGAGGTCCCTTCTTCAGATGAGAGGAGTGATTGGTGGTGGGTGTTCTACCAAGGAACTGCATTTCCAACTTTGGCGAGGGTTTTGTTGTATGAGGTTGCTTCCAACTGGCTAGCTTGTTTTCCTATTTCTGCACAAAAACATGTCTATGATGTTTTCTTTGTCGAAGGACTTGCCACTGAGGTTGTTCAGACTCTAGTGCCTTGTCTACAGCATAATGCACGGGATAGTCTTCGCGTCAACACTGTATGCTTAAATGCTGAAAGATTACTTGTCCTTTGCTTGTTTGAAAATGATGGAATACTCCAGATGGCTAGAGAATTTGGCAGTTCTTTTCAATCGGAAGATTCTATTAGTGAAAGAATGAAGCCAGCTGTATCTAGGGTGGCACAGCTCATGGTGTCTATACCTGACAAAGCGCCATTAGGAGCCCCAACTTCACTTTCATCACATTTCTTCTTCAAGCAGATTGCCATTCAACTTCTTGCTGGAGTTGAAGAAAAGAGTATGAAACTACATGATGAAGCAGCTAGCTTGGATAAAAATGGCATGGATGGTACCTTCCTATTTGTTGGAGAAACATTTGCTCGCATTTGTCGGCGTGGGTCTATAGATGTGCTATTAGGAGAGGTCATCCCACGGATTCTCGCACATATAAGGAGCTGCTTGCAGTCAAATACTGATTTAATTGATGCAGATGTATTTGAGACAAATCCTGGTTTTCTATTTTGGTCAAAGATGATGGAAGCAATTAAAGATCCATATGCTGTGGAAAGAATGTCTGAACAGATTCTGCATTATCTGGCAACTGAACAAGCAAGTGATACTGAAGCTTACTGGACTCTGTGGATGTTGTTTCATCAAATTTTTTATCGTCAAAAGTCAGTGAGGTCTATGTTTATTGACAAATTTTTACTCTGGAAAGTATTTCCTCTTTGTTGCTTGAGATGGATCCTTCAATTTGCCGTTCTTGAATGCCCACCTGGAGCCAATTCACTAACAAAGGGCCACAATACCCGTGGTCTTATAGACACAGTGCAACACTTGGTAACAGTATGGTCCAAACAGGAATTTGTGCAGTCAGCCCCAATAGAGCAGCAAACTTATATAACCGCAGCTGTAGGGATTTCTCTAGAGAAGATGTCAAAAGAAGAACTAGATGCAACGAAGGAAGTGATGCATTCAATCCTTCGAGGAGTTAGCTGTAGGCTGGAGAGCCCTGACCATCTGGTTCGGAGAATGGCTAGCAGTGTCGCATTAGTATTTTCTAAAGTGGTTGACCCAAAAAATCCTTTGCACCTTGATGATAGCTGCAGTGGGGAGACTATTGACTGGGAGTTTGGATTAGTTACCCCAGATAAAGGGATTCAAGTTGCCTCATCTTCCACGGAAAAGGGTATAAAAGAAATAGAAAATTCTACTGCTTCAGTTGCAGGAAAGGAATTGGACTCTGCAGTTGACGGTGGAGCGGGCAATAATTTGAAGGATAGAGACAAGAAATTATCTAAATTTAGGTTAGTTGATCCAGATGAGATTATTGATCCAGCAATGTTAAATGATGAATCCACTTCTGGTGGCAGTGATGATGATAATGCAAGTGACAATTCTGAAAGCTCAAATGACTCATCTTTACAGCCATATGACTTGTCAGATGATGACACGGATTTGAAAAAAAAAATCACGCAGGTGGTTGATGTTGTTGGAGCATTACGGAAATCTGACGATGCAGATGGTGTTGAAAGGGCTCTTGATGTTGCCGAAAATCTTGTTCGTGCCTCGCCAGATGAGCTTCGGCATTTGACAGGCGACCTTGTCAGAACACTTGTACAGGTTCGTTGTTCTGATTTGACCATAGAAGGGGAGGAAGAATCGGCTGAAGAAAAGAGGCAAAAAGCACTGGTTGCTTTGCTCGTCACTTGTCCATTCGAGTCTCTTGATGCTCTCCATAAATTATTATATTCACCCAATGTGGATGTCAGTCAACGCATACTTATACTTGACATCATGACAGATGCTGCACAGGAACTCGCTGATACTAGAACCATGAAACCGAAACGTCAGCCTGGAGCCCTCATATCAACCATTTCGGAGACTCAACCATGGTTCCTGCCCTCTAGCATAGGGCCTCCCGGAGCTGGTTCATGGAAAGAGATGTCAGGAACAGGATCTTTGTTGAATTTATCATATAGCTATGAGAGGGAACTTCCCCCAAAACCCAATCAGGTAAAAAGAGGAAAGACTCGCCGATGGAGCCTCAGATTGAAAAATATGCCAGAAAGCCAGACAGAATGGTCTCAGAACAAGTTTCCTTTGTATGCAGCAGCATTTATGCTTCCAGCCATGCAGGGGTTTGATAAGAGAAGGCATGGTGTTGACTTGCTTGCTAGGGACTTTATTGTCCTGGGAAAACTGATATATATGCTTGGTGTATGTATGAAATGTGCAAGTATGCATCCCGAAGCGTCGGCTTTGGCTTCACCACTTCTGGATATGCTAAGCTCCAGGGAGGTATGCTATCACAAAGAAGCTTATGTCAGGAGATCTGTCCTTTTTGCAGCTTCATGCGTGTTGATGGCACTTCATCCCTCTTATGTAGCATCTGCCTTGGTGGAAGGAAATCCTGAGCTTTCTAAAGGGCTTGAATGGGTTCGCACATGGGCTCTTAATGTAGCTGATACAGATACTGATAAAGACTGCTATACTAGAGAAAAAGGAGAAAAACCTTGA 2958 0.4341 MENGPKRRRRELEPTVLHKVGDVISAINEAKHVDQLICALHSLAVRLFPLDSSAFSGRKISYSFCSIDEQYRDQVLRTEVPSSDERSDWWWVFYQGTAFPTLARVLLYEVASNWLACFPISAQKHVYDVFFVEGLATEVVQTLVPCLQHNARDSLRVNTVCLNAERLLVLCLFENDGILQMAREFGSSFQSEDSISERMKPAVSRVAQLMVSIPDKAPLGAPTSLSSHFFFKQIAIQLLAGVEEKSMKLHDEAASLDKNGMDGTFLFVGETFARICRRGSIDVLLGEVIPRILAHIRSCLQSNTDLIDADVFETNPGFLFWSKMMEAIKDPYAVERMSEQILHYLATEQASDTEAYWTLWMLFHQIFYRQKSVRSMFIDKFLLWKVFPLCCLRWILQFAVLECPPGANSLTKGHNTRGLIDTVQHLVTVWSKQEFVQSAPIEQQTYITAAVGISLEKMSKEELDATKEVMHSILRGVSCRLESPDHLVRRMASSVALVFSKVVDPKNPLHLDDSCSGETIDWEFGLVTPDKGIQVASSSTEKGIKEIENSTASVAGKELDSAVDGGAGNNLKDRDKKLSKFRLVDPDEIIDPAMLNDESTSGGSDDDNASDNSESSNDSSLQPYDLSDDDTDLKKKITQVVDVVGALRKSDDADGVERALDVAENLVRASPDELRHLTGDLVRTLVQVRCSDLTIEGEEESAEEKRQKALVALLVTCPFESLDALHKLLYSPNVDVSQRILILDIMTDAAQELADTRTMKPKRQPGALISTISETQPWFLPSSIGPPGAGSWKEMSGTGSLLNLSYSYERELPPKPNQVKRGKTRRWSLRLKNMPESQTEWSQNKFPLYAAAFMLPAMQGFDKRRHGVDLLARDFIVLGKLIYMLGVCMKCASMHPEASALASPLLDMLSSREVCYHKEAYVRRSVLFAASCVLMALHPSYVASALVEGNPELSKGLEWVRTWALNVADTDTDKDCYTREKGEKP* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1014 985 PANTHER TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER 7 978 - -
Vvi17g1014 985 Gene3D - 631 764 IPR038528 -
Vvi17g1014 985 Pfam Telomere length regulation protein 639 750 IPR019337 -
Vvi17g1014 985 MobiDBLite consensus disorder prediction 597 626 - -
Vvi17g1014 985 MobiDBLite consensus disorder prediction 589 629 - -
Vvi17g1014 985 SUPERFAMILY ARM repeat 285 939 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1014 K11137 - vvi:100256409 1873.98