Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1008 ATGGGGAAGAAAACGAAAAAGCCCGGGAAAGGAAAGGAGAAAACAGAGAAAAAAACTGCGAAAGCTGAGGAAAAGAGAGCTCGCAGAGAGAACAAGAAGATCTCCGAAGAAGATGACATCGATGCCATTCTGTTGAGCATACAGAAGGAGGAGGCTAAGAAGAAGGAAGTTCACATCGACGAAAATGTCCCTGCGCCGACGCCTCGCTCCAACTGTTCCCTGACGATGAATCCCTTGAAAGAGACGGAGCTGATTCTTTATGGAGGTGAATTCTACAATGGCAACAAGACATTTGTATATGGTGATCTTTATCGACATGATATTGAGAAGCAGGAGTGGAAATTGATATCTAGCCCTAATAGTCCACCTCCTCGTAGTTCTCATCAAGCTGTTGCTTGGAAGAATTATCTCTATATCTTTGGTGGTGAGTTTACGTCCCCGAATCAAGAGTGCTTCCATCACTACAAGGACTTTTGGGTGTTGGACCTGAAAACAAATCAATGGGAACAACTAAATCTGAAAGGATGTCCAAGTCCACGGTCAGGTCATCGAATGGTTTTATACAAGCACAAGATTATTGTTTTTGGTGGCTTCTATGACACTCTCAGAGAAGTAAGGTATTTTAATGATTTGCATGTATTTGACCTGGATCAGTTCAAGTGGCAAGAAATAAAACCTAGGCTTGGTTCCATGTGGCCAAGTGCCAGGAGTGGTTTTCAGTTTTTTGTGTTCCAAGATGAGATCTTTCTGTATGGTGGCTACTCCAAAGAAGTTTCATCTGATAAAAACAACTCAGAGAAAGGAATTGTTCATTCAGACATGTGGTCCCTTGACCCTAGGACTTGGGAGTGGAACAAGGTGAAGAAATCTGGGATGCCTCCTGGACCTCGTGCTGGGTTTTCTATGTGTGTCCATAAAAAAAGGGCTGTGCTATTTGGGGGTGTAGTTGATATGGAAGTTGAAGGAGATGTAATGATGAGCTTATTCTTGAATGAGCTCTATGGATTCCAATTAGATACTCACCGCTGGTACCCATTGGAGCTGCGGAAGGAAAAATCAACTAAAGATAAGGTCAAAAAGAGTTCTGATAAAAAATATAATGGGGCTACTCTTGACAATAAGATTGGTTCTATTGATCTAGAGAAGTGTGAGGAGAATGATGGAGATGATAATTTGGAATCCCATGAAGAAGCAGCTGACCTAGAAAGTAGCATTGATGAAATATCTCGTCATATGACAACAAACATTACTGTTAATGATGGTGGACCATCCATCAAGTCTGATGGAAGACCTCATGAATCTGGTGCCCAATTGGATCTACAAAATTCCATTTCATCTGAGATTGTGAAACCTTGTGGCCGTATCAATTGCTCCATGGTTGTTGGAAAAGACACACTATATATTTATGGGGGCATGATGGAAGTCAAGGATCAAGAAATTACACTTGATGATTTGTATTGCCTTAATCTCAGCAAACTTGATGAATGGAAGTGCATCATACCGGCTTCTAAATCTGAGTGGATAGAAGCTTCAGAGGAAGAAGATGAGGATGAAGACGAAGATGATAGTGAAGATGAAGACTGCAATAGTGGAAGCAATAGTGATGAGACTGACGACGATGATGATGTAGAGGCTAAGGATGGATCAAGATCCCTCGAAATGGGAGATGCTGTTGCTATAATCAAAGGTGAAGGAAAGAATCTTCGGAGGAAGGAGAAGCGGGCTAGAATAGAGCAGATCAGAGCCAATCTTGGCCTTTCAGATTCACAGAGAACCCCAATTCCTGGAGAAACCTTGAAGGACTTCTATAAGCGTACCAATTTGTACTGGCAAATGGCAGCACATGAGCACACTCAACACACTGGAAAGGAGCTACGAAAGGATGGTTTTGATCTTGCTGAAGCTCGATACAGAGAGCTTAAACCAATCCTTGATGAGTTGGCCATACTAGAGGCAGAGCAGAAGGCTGAAGAGGCTGAAGGAGTGGAGACTAGTATGAGAAAGAGAGGCAACAAGAAAAACAGCAAGCGTTCAGCTCCCCAAAAGTAG 2049 0.4246 MGKKTKKPGKGKEKTEKKTAKAEEKRARRENKKISEEDDIDAILLSIQKEEAKKKEVHIDENVPAPTPRSNCSLTMNPLKETELILYGGEFYNGNKTFVYGDLYRHDIEKQEWKLISSPNSPPPRSSHQAVAWKNYLYIFGGEFTSPNQECFHHYKDFWVLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYFNDLHVFDLDQFKWQEIKPRLGSMWPSARSGFQFFVFQDEIFLYGGYSKEVSSDKNNSEKGIVHSDMWSLDPRTWEWNKVKKSGMPPGPRAGFSMCVHKKRAVLFGGVVDMEVEGDVMMSLFLNELYGFQLDTHRWYPLELRKEKSTKDKVKKSSDKKYNGATLDNKIGSIDLEKCEENDGDDNLESHEEAADLESSIDEISRHMTTNITVNDGGPSIKSDGRPHESGAQLDLQNSISSEIVKPCGRINCSMVVGKDTLYIYGGMMEVKDQEITLDDLYCLNLSKLDEWKCIIPASKSEWIEASEEEDEDEDEDDSEDEDCNSGSNSDETDDDDDVEAKDGSRSLEMGDAVAIIKGEGKNLRRKEKRARIEQIRANLGLSDSQRTPIPGETLKDFYKRTNLYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELAILEAEQKAEEAEGVETSMRKRGNKKNSKRSAPQK* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1008 682 MobiDBLite consensus disorder prediction 656 682 - -
Vvi17g1008 682 MobiDBLite consensus disorder prediction 509 543 - -
Vvi17g1008 682 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 669 - -
Vvi17g1008 682 MobiDBLite consensus disorder prediction 12 35 - -
Vvi17g1008 682 Pfam Galactose oxidase, central domain 453 501 - -
Vvi17g1008 682 Coils Coil 12 37 - -
Vvi17g1008 682 MobiDBLite consensus disorder prediction 416 435 - -
Vvi17g1008 682 Pfam Galactose oxidase, central domain 135 187 - -
Vvi17g1008 682 Pfam Galactose oxidase, central domain 84 132 - -
Vvi17g1008 682 Pfam Kelch motif 236 290 IPR011498 GO:0005515
Vvi17g1008 682 SUPERFAMILY Kelch motif 82 498 IPR015915 GO:0005515
Vvi17g1008 682 Pfam Domain of unknown function (DUF4110) 585 670 IPR025183 -
Vvi17g1008 682 Gene3D - 46 371 IPR015915 GO:0005515
Vvi17g1008 682 MobiDBLite consensus disorder prediction 507 549 - -
Vvi17g1008 682 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g1008 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 28.571 3.66e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1008 - - vvi:100256953 1262.28