Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1004 ATGGGAACTGGGTTTTGTACAAAACTGGGAAAAACATGGGCGAAAGCGGAGAAGGGTTTAAACGACGCCGTTTCTAGGAGTTTCGTCGGAAAATACTTCAAGTTACAGGCCAGAAAGACTTGCTTCACCAAGGAGCTCCGCGCCGCCACCGCCACGTTTCTCACCATGGCTTATATCCTCACCGTCAACGCCACCATTGTCGCCGACTCCGGCGGCACCTGCTCCCTATCCGACTGCACGCCTCCGGGGGGGCCGGACTGCGTTGTCAAGCCGAACTCCGGCTACGAGACCTGTCTCGCGAGGATCAGAAACGACCTCGTGGTGGTCACTGCGTTGTCCGCTATGATCGGCTCGTTTTTCATGGGTGTATTGGCGAATTTGCCCCTGGCTGTGGCTCCAGCCATGGGCCCAAATGCTTACTTCACTTACGACTTAGTGGGCTTCCATGGAACTGGGTCCATGACGTACGGAACTGGGCTCGCCGTTCTCTGTGTCGAGGGGTTAGCGTTTATCTTCTTATCGGCCTCTGGCCTGAGGGCTAAGGTAGCCCGGTTGATCCCCCAGTCAGTTAGGCTCGCATTTGCCGCTGGCATTGGACTGTTCATTGCTTTTGTGGGCCTCCAGGCCCACCAGGGAGTGGGCCTTGTTGGTCCTGATCCATCCACATTGGTCACCGCGGCCGCCTGCGCGCATACCGACCCAGTAACCGGCGCGTGCGTCGACGGGAAGATGCGGAGCCCTACGTTTTGGCTGGGCATGGTGGGGCTTGTGATTACGTGTTATGGGCTAATGAAGGAAGTGAAGGGTAGTATGATATATGGAATACTGTTTGTGACCCTGATTTCATGGATTAGAGGCACTGCAGTTACATATTTTCCTTACACCAAGGTTGGTGACACCAAATTCAACTACTTCAAGAAAGTGGTGGATTTCCACAGAATAGAATCCACGGCTGGGGCCATAAGCTTTACTAATTTTAACAGAAGTGAGGTCTGGGTGGCCCTAATGACGTTATTGTATGTGGATGTGCTCGCCACCACAGGGATACTGTACACAATGGCTGAGCTTGGGGGCTTTGTGGATGACAAGGGAAGCTTTGAGGGTGAATACATGGCGTACTTGGTTGATGCAGGGACGACAGTTGTGGCATCCACGCTCGGGGGATCTCCGGTTGCAACGTATGTGGAGTCATCGGCGGGGCTGAGGGAAGGCGGGCGGACAGGGCTGACAGCGGTGATTGTATCGTTTTATTTCATGCTGTCGTTGTTTTTTACTCCATTGTTAACCAGTGTACCTCCATGGGCAATAGGGCCATCACTGGTGATGGTTGGGGTGCTGATGATGAAGGTGGTGAAGGACATAGAGTGGGGTAACGTGAAGGATGCAGTGCCGGCTTTTGCCACCATGGTTCTCATGCCACTGACTTATTCCATAGCAAATGGGATCATAGGTGGAGCTGGAATCTACATTGTGCTGAGCTTGTATGATTATGTTGTGTGGGTGGTGAGGAGGGCGGCCAAGATGAGAAGAGAGAAAAATCAAGTGTCTGCTGCAGGTGGTGGAGGTCAAGATGTGGAAATGACTTAA 1587 0.5299 MGTGFCTKLGKTWAKAEKGLNDAVSRSFVGKYFKLQARKTCFTKELRAATATFLTMAYILTVNATIVADSGGTCSLSDCTPPGGPDCVVKPNSGYETCLARIRNDLVVVTALSAMIGSFFMGVLANLPLAVAPAMGPNAYFTYDLVGFHGTGSMTYGTGLAVLCVEGLAFIFLSASGLRAKVARLIPQSVRLAFAAGIGLFIAFVGLQAHQGVGLVGPDPSTLVTAAACAHTDPVTGACVDGKMRSPTFWLGMVGLVITCYGLMKEVKGSMIYGILFVTLISWIRGTAVTYFPYTKVGDTKFNYFKKVVDFHRIESTAGAISFTNFNRSEVWVALMTLLYVDVLATTGILYTMAELGGFVDDKGSFEGEYMAYLVDAGTTVVASTLGGSPVATYVESSAGLREGGRTGLTAVIVSFYFMLSLFFTPLLTSVPPWAIGPSLVMVGVLMMKVVKDIEWGNVKDAVPAFATMVLMPLTYSIANGIIGGAGIYIVLSLYDYVVWVVRRAAKMRREKNQVSAAGGGGQDVEMT* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1004 528 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 17 513 IPR045018 GO:0015205
Vvi17g1004 528 Pfam Permease family 102 481 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g1004 Vvi-Chr17 12257609 12259195 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1004 K06901 - vvi:100245103 1017.68