Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g1000 ATGATGACATATGCAGAACCTTTGAGTCCAGAAGTTGATGCGATACCAGTCAACATTGCTCCCAGAAGACCCCGGATTCTACTTGCTGCTAGTGGGAGTGTAGCTGCTATGAAGTTTGGGAATCTCGTCCATTCTTTTTGTGAATGGGCAGAAGTAAGAGCAGTTGTCACAAAGGCTTCTTTACACTTCATTGATAGAGCAGCACTGCCTAAGGATTTATATCTTTACACTGATGATGATGAATGGTCCAGTTGGACAAAATTAGGAGACAGTGTGCTTCACATTGAGCTCCGTAGGTGGGCTGATGTCATGGTAATCGCCCCATTATCAGCAAATACACTTGGCAAGATTGCCGGGGGACTGTGTGACAACCTGCTGACATGCATTGTGCGAGCGTGGGACTACAGCAAGCCAATGTTTGTTGCGCCAGCTATGAACACCTTCATGTGGACCAATCCTTTCACAGAACGCCATCTTATGACAATTGATGAACTTGGAATTTCTCTTATTCCACCTGTCACTAAAAGGCTGGCTTGCGGAGATTATGGGACTGGTGCAATGGCTGAACCTTTTCTCATCCACTCAACCGTAAGACTCTTCTTGGAGACACGGGCTCAATCAAGTAGCAGTAATGTGCAGTAA 642 0.4579 MMTYAEPLSPEVDAIPVNIAPRRPRILLAASGSVAAMKFGNLVHSFCEWAEVRAVVTKASLHFIDRAALPKDLYLYTDDDEWSSWTKLGDSVLHIELRRWADVMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYSKPMFVAPAMNTFMWTNPFTERHLMTIDELGISLIPPVTKRLACGDYGTGAMAEPFLIHSTVRLFLETRAQSSSSNVQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g1000 213 FunFam Phosphopantothenoylcysteine decarboxylase 18 210 - -
Vvi17g1000 213 Pfam Flavoprotein 25 195 IPR003382 GO:0003824
Vvi17g1000 213 Gene3D - 23 212 IPR036551 GO:0003824
Vvi17g1000 213 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 23 200 IPR036551 GO:0003824
Vvi17g1000 213 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 20 206 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g1000 K01598 - vvi:100246682 434.491