Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0994 ATGTCTTATTTGCAGAAAGACAACATACAAAACCAACGGGAAAATGTTGTTCTTACTGTAGCAAATGCACAGTGTCGACTTGGCATACCTGTTGAAGCTAATCCAAAAATTGATGAAAAAGCTGTCACTGAAGTTTTCTTGAAGGTGCTGGATAACTACATCAAATGGTGCAAATACTTGCGGATACGTCTTGCATGGAATAGTATAGAAGCAATTAATAGGGACAGGAGACTTTTTCTGGTTTCATTGTACTTTCTCATATGGGGTGAAGCTGCAAATGTTCGTTTCCTTCCTGAATGCATATGCTATATATTCCACCATATGGCAAGAGAGTTAGATGCAATATTGGATCATGGTGAAGCTAATCATGCTGCCAGTTGTATAACTGCAGATGGTTCAGTTTCCTTCCTTGAGCAAATCATTTGTCCTATATATGAGACAATGGAAAAGGAAGCTGCTAGAAACAATAATGGGAAAGCTGCACATTCTGCATGGCGGAATTATGATGACTTCAATGAATTTTTCTGGTCCCCTGCTTGCTTGGAGCTGAGCTGGCCTATGAAGAGAGATTCATCATTTCTGTTAAAACCTAAAGGGCGGAAAAGGACTGGGAAAACCACTTTTGTTGAGCACAGAACATTTCTTCATTTATATAGGAGTTTTCATCGACTGTGGATATTTTTGGCTTTAATGTTCCAGGCTTTGACAATTATAGCCTTCAATCATGGAAATATTGACCTGGATACCTTTAAGACAATACTTAGCATTGGACCAACATTTGCAATCATGAACTTCGCAGAGAGCTGTTTAGATGTGCTGCTTATGTTTGGGGCTTATGCCACTGCAAGAGGCATGGCCATTTCAAGGCTAGTCATTAGGTTTTTCTGGTGTGGCTTTAGCTCTGTATTTGTGACGTATGTCTACCTGAAGCTTCTCCAGGAAAGAAAAAATCCAAACTCAGATTCATTCTATTTCCGGATTTATATTATTGTATTGGGTGTTTATGCTGCTTTGCGCCTAGTCCTTGCAATGTTACTTAAATTTCCGTCATGTCATGCACTCTCCGAAATGTCTGACCAGGCATTCTTTCGATTTTTCAAGTGGATTTATCAGGAGCGATACTATGTGGGCCGTGGTCTTTTTGAAAGTACAAGTGATTATTTCAGGTATGTGGTCTACTGGCTGGTGATATTTGCATGCAAATTTACATTTGCTTACTTCCTCCAGATTAGACCACTAGTCAAACCGACCAATATTATTGTGGACCTTCCATCTTTGACATACTCATGGCATGATTTGATCTCGAAGAACAATAATAATTTGTTGACATTAGCTAGCATATGGGCTCCTGTTATTGCTATCTATCTCATGGACATTCTTATATGGTACACTATCTTATCTGCAATTGTTGGTGGTGTTAAGGGTGCACGTGCTCGGTTAGGCGAGATACGTTCAATTGAAATGGTGCATAAACGTTTTGAAAGCTTTCCAGCAGCCTTTGTCAATAACCTTGTGTCTCCTATGATGAAAAGGATGCCTTTTAATACACAATCAGCTCAGGTTTCTCAGGATATGAACAAGACACATGCAGCCATTTTTTCTCCATTTTGGAATGAGATCATTAAAAGCTTGCGTGAGGAAGATTATATTAGTAACCGGGAGATGGACTTGCTTTCTATTCCTAGCAACACAGGAAGTTTGAGATTAGTTCAATGGCCTTTGTTTCTTCTAAGCAGTAAGATCTTGTTGGCAATCGATTTAGCTCTGGACTGTAAAGATTCACAGGCAGATCTTTGGAGTAGAATACGTAGGGATGAATACATGGCATATGCGGTTCAGGAGTGTTACTACAGTGTTGAAAAAATTTTACATTCCCTGGTTGATGGTGAAGGAAGCCTTTGGGTTGAAAGGATCTTCCGGGAGATCAATAATAGCATATTGGAGGATTCACTTTTTACAATCTTAGATCCCCAGAAGCTTCCAATGGTATTACAAAGATTGACGGCATTGACTGGACTTCTGATTAGGAATGAAACTCCTGACCGTGCAATAGGTGCTGCAAAATCTGTGCGTGAAATATATGATGTTGTTACACATGACCTGCTGACATCCAATTTAAGGGAGCAGCTTGATACATGGAATATATTGGCAAGAGCTAGAAATGAGGGGCGTCTGTTTTCTAGGATAGAATGGCCTAAAGATCCTGAAATTAAGGAGCAGGTGAAGCGGTTGCACCTATTTCTCACTGTGAAAGATTCTGCAGCTAATATTCCAAAGAATCTAGAAGCACAGAGGCGGTTACAATTTTTTACAAATTCATTGTTTATGGATATGCCTTCAGCAAAGCCAGTTTGTGAAATGATGCCATTCAGTGTCTTCACCCCATACTACAGTGAGACTGTACTATATAGTTCAACCGATCTGCGGTCAGAAAATGAGGATGGGATATCTACTCTTTTCTATCTTCAGAAAATCTTTCCAGATGAATGGGAGAATTTCTTGGAACGCATTGGTCGGCTTGGGTCTAATGAGGATGCAGATCTTCAAGAAAGCTCTAGTGATTCGTTGGAGCTTCGGTTTTGGGCATCTTATCGAGGCCAGACTCTAGCTAGGACAGTGCGTGGTATGATGTATTATAGACGGGCTTTAATGCTACAAAGCTACTTGGAAAGTAGATCATTTGGAGTAGATGACAATAATTCTCTAGCCAACTTCCCCACAACTCAAGGATTTGAGCTGTCACGTGAAGCAAGGGCACAAGTAGATCTGAAGTTCACATATGTAGTATCGTGCCAAATTTATGGGCAACAGAAACAGAAGAAGGCTTCAGAGGCAGCTGATATTGCTCTTTTGTTGCAGAGGAATGAGGCACTTCGAGTTGCTTTCATACATGTTGAAGACAATGGTGCAACTGATGGAAAGACTACAAAAGAATACTATTCAAAGCTTGTGAAAGCTGATGGAAATGGGAAAGATCAGGAAGTATATTCCATCAAACTTCCTGGAGATCCAAAGCTTGGAGAAGGTAAGCCTGAAAACCAAAATCATGCTATAATCTTCACACGTGGGGAAGCTATTCAAACTATTGATATGAATCAGGATAACTACCTGGAGGAGGCAATGAAAATGAGAAATCTTCTTGAGGAATTTCGAGGGAATCATGGTCTTCGACCTCCAACTATTCTTGGTGTTAGAGAGCATGTTTTCACCGGAAGTGTCTCATCTTTAGCCTGGTTTATGTCAAATCAAGAAACTAGCTTTGTGACCTTGGGCCAACGAGTTTTGGCTAGTCCTCTCAAAGTTCGTATGCACTACGGGCATCCTGATGTGTTCGACCGAATTTTTCATATATCTCGAGGTGGCATCAGTAAAGCATCACGTGTAATTAATATTAGTGAAGATATATATGCAGGGTTCAATTCCACACTGAGGCAGGGTAATATTACACACCATGAGTACATTCAGGTTGGAAAGGGTAGAGATGTTGGGTTAAACCAGATTGCCCTATTTGAAGGAAAAGTGGCTGGTGGAAATGGAGAACAAGTATTAAGCAGGGACATCTACAGGCTTGGACAACTTTTTGATTTCTTTAGAATGCTTTCTTTCTTCTTTACTACCGTTGGATACTATGTCTGCACAATGATGACAGTTATTACGGTATATATTTTCTTATATGGAAGAGTTTACCTGGCTTTCTCTGGGCTTGATGAGGGAATTGAAAGGTTTGCTAAATTGACTGGTAACACGGCACTAAGTGCAGCTCTAAATGCTCAGTTCCTGGTCCAGATTGGAGTTTTTACTGCTGTGCCAATGGTAGTGGGTTTTATACTTGAATCGGGACTGCTGAAGGCTGTTTTCAGTTTTATCACAATGCAGCTTCAGTTATGTTCCGTCTTCTTCACATTCTCATTAGGAACTAGAACTCATTATTTTGGACGTACTATCCTCCATGGCGGTGCTAAATACAGAGCAACTGGTAGAGGCTTTGTTGTTCGTCACATCAAGTTTGCCGAAAATTACAGGCTGTACTCAAGAAGTCATTTTGTTAAGGCGCTTGAAGTGGCTCTGCTCCTAATAGTATACATCGCATATGGGCACACAGGAGGAGGCTCTGTGTCTTTTATTCTGTTAACTCTTAGCAGTTGGTTCCTTGTCATATCATGGCTCTTTGCTCCTTATATTTTTAATCCCTCAGGTTTTGAGTGGCAAAAGACTGTGGAGGACTTCGATGATTGGACCAGTTGGCTCCTATATAAAGGTGGAGTTGGGGTGAAGGGAGACCATAGCTGGGAATCTTGGTGGGAGGAAGAACAGGCGCATATCCAAACGCTAAGAGGCCGTATATTGGAAACAATTTTAAGCTTAAGGTTTATTATATTTCAATATGGCATTGTATACAAACTCCATCTCACACAAAAAGATACCTCACTTGCGATTTATGGGTTCTCCTGGGTTGTGCTGGTTGGCATTGTCATGATATTCAAGTTATTCAGCTTTAGCCCAAAAAAATCCAGCAACATCCAGCTAGTGATGCGATTTTCACAGGGAGTTTTTTCCTTAGGACTTGTTGCAGCTCTTTGCCTTGTTGTTGCCTTCACCGATCTGTCAATTGTAGACCTGTTTGCTAGCATCCTTGCATTTATTCCTACTGGATGGATGATTCTATCTTTAGCGATCACATGGAAAAGGGTGGTAAGGAGCCTAGGCTTATGGGATTCAGTCCGGGAGTTTGCTAGAATGTATGATGCTGGGATGGGTATGATCATTTTTGCCCCAATAGCAGTGCTATCATGGTTCCCATTTATTTCCACCTTCCAGTCTCGTCTTCTCTTTAACCAAGCATTCAGCCGTGGACTGGAGATCTCCATCATCCTTGCAGGAAACAAAGCTAATGTCCAGGCCTGA 4905 0.409 MSYLQKDNIQNQRENVVLTVANAQCRLGIPVEANPKIDEKAVTEVFLKVLDNYIKWCKYLRIRLAWNSIEAINRDRRLFLVSLYFLIWGEAANVRFLPECICYIFHHMARELDAILDHGEANHAASCITADGSVSFLEQIICPIYETMEKEAARNNNGKAAHSAWRNYDDFNEFFWSPACLELSWPMKRDSSFLLKPKGRKRTGKTTFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNHGNIDLDTFKTILSIGPTFAIMNFAESCLDVLLMFGAYATARGMAISRLVIRFFWCGFSSVFVTYVYLKLLQERKNPNSDSFYFRIYIIVLGVYAALRLVLAMLLKFPSCHALSEMSDQAFFRFFKWIYQERYYVGRGLFESTSDYFRYVVYWLVIFACKFTFAYFLQIRPLVKPTNIIVDLPSLTYSWHDLISKNNNNLLTLASIWAPVIAIYLMDILIWYTILSAIVGGVKGARARLGEIRSIEMVHKRFESFPAAFVNNLVSPMMKRMPFNTQSAQVSQDMNKTHAAIFSPFWNEIIKSLREEDYISNREMDLLSIPSNTGSLRLVQWPLFLLSSKILLAIDLALDCKDSQADLWSRIRRDEYMAYAVQECYYSVEKILHSLVDGEGSLWVERIFREINNSILEDSLFTILDPQKLPMVLQRLTALTGLLIRNETPDRAIGAAKSVREIYDVVTHDLLTSNLREQLDTWNILARARNEGRLFSRIEWPKDPEIKEQVKRLHLFLTVKDSAANIPKNLEAQRRLQFFTNSLFMDMPSAKPVCEMMPFSVFTPYYSETVLYSSTDLRSENEDGISTLFYLQKIFPDEWENFLERIGRLGSNEDADLQESSSDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSYLESRSFGVDDNNSLANFPTTQGFELSREARAQVDLKFTYVVSCQIYGQQKQKKASEAADIALLLQRNEALRVAFIHVEDNGATDGKTTKEYYSKLVKADGNGKDQEVYSIKLPGDPKLGEGKPENQNHAIIFTRGEAIQTIDMNQDNYLEEAMKMRNLLEEFRGNHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHISRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFFFTTVGYYVCTMMTVITVYIFLYGRVYLAFSGLDEGIERFAKLTGNTALSAALNAQFLVQIGVFTAVPMVVGFILESGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGHTGGGSVSFILLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGDHSWESWWEEEQAHIQTLRGRILETILSLRFIIFQYGIVYKLHLTQKDTSLAIYGFSWVVLVGIVMIFKLFSFSPKKSSNIQLVMRFSQGVFSLGLVAALCLVVAFTDLSIVDLFASILAFIPTGWMILSLAITWKRVVRSLGLWDSVREFARMYDAGMGMIIFAPIAVLSWFPFISTFQSRLLFNQAFSRGLEISIILAGNKANVQA* 1635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0994 1634 Pfam 1,3-beta-glucan synthase component 757 1531 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vvi17g0994 1634 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 77 185 IPR026899 -
Vvi17g0994 1634 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 5 1627 - -
Vvi17g0994 1634 SMART FKS1_dom1_2 75 188 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0994 Vvi-Chr17 12031217 12098518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0994 5 1633 Glycosyltransferase AT2G36850 78.445 0.0 2683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0994 K11000 - vvi:100255285 3220.25