Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0990 ATGCCAGCAGCTGGCTCCAAGGGTGCTCCTAAAAACCATGGAGAGTTAAAAGATGATACAAGCTCATCACGTGAGGAAAAGAAGATATTAATGCATGCCCTTTCCAGACCTCCATTTGGAAATTATCGTGTTTGGTGGTCTCTTGCAGATTCCAAATATGCAGGGACTGCATTGTTTGTTAAGAAGTGTTTTCAACCAAAAAAGGTCTCTTTCTCTATTGATCAAAAAGCTTCAAAGCATGAGCCTGAAGGTCGGGTTATTTTGGCTGAATTCGAGTCTTTCCGCCTATTGAATACATATGTGCCAAATAACGGTTGGAAAGATGAGGAAACATCATTTCAGAGGAGAAGAAAATGGGATAAGAGGATGCTTGAATTTGTTGTGCAATCTTCTGATAAGCCTCTTATTTGGTGTGGCGATCTGAATGTTAGTCACGAAGAGATTGATGTGAGCCATCCAGAATTCTTCAGTGCAGCAAAGCACAATGGATATGTTCCTCCAAATAAAGAGGACTGTGGGCAGCCTGGATTTACCTTGGCTGAGAGGAGGCGTTTTGGTGGCATATTGAAAGAGGGGAAGCTAGTAGATGCATACAGACTCCTACACAAGGAAAAAGACATGGAAGGTGGCTTCTCATGGTCTGGAAACCCTATTGGAAAGTATAGAGGGAAGAGGATGAGAATAGACTATTTCATAGTTCCAGAGGCACTCAAAGATAGGATTGTTGCATGTGAGATCCATGGACAGGGGATTGAATTAAAAGGTTTCTACGGAAGTGACCATTGCCCGGTTTCCCTGGAGCTTTCCGAGACAAGCTCCGGTTCCAACCAAAGCTAA 837 0.4313 MPAAGSKGAPKNHGELKDDTSSSREEKKILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQKASKHEPEGRVILAEFESFRLLNTYVPNNGWKDEETSFQRRRKWDKRMLEFVVQSSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKHNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVDAYRLLHKEKDMEGGFSWSGNPIGKYRGKRMRIDYFIVPEALKDRIVACEIHGQGIELKGFYGSDHCPVSLELSETSSGSNQS* 279
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0990 278 NCBIfam exodeoxyribonuclease III 40 268 IPR004808 GO:0004518|GO:0006281
Vvi17g0990 278 ProSiteProfiles AP endonucleases family 1 profile. 1 270 IPR004808 GO:0004518|GO:0006281
Vvi17g0990 278 PANTHER AP ENDONUCLEASE 37 271 IPR004808 GO:0004518|GO:0006281
Vvi17g0990 278 CDD Ape1-like_AP-endo 36 268 - -
Vvi17g0990 278 Gene3D Endonuclease/exonuclease/phosphatase 18 270 IPR036691 -
Vvi17g0990 278 SUPERFAMILY DNase I-like 37 268 IPR036691 -
Vvi17g0990 278 Pfam Endonuclease/Exonuclease/phosphatase family 51 261 IPR005135 GO:0003824
Vvi17g0990 278 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0990 - - vvi:100258672 580.867