Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0983 ATGCAAAACGTACATGCAGGCATGAAAAATCCCATTCTCAAACTACCCCTCCTCCTCCTCAAACCCTTCTTCCTCTCTCTCTTCCTCTCCCTCGCTGTCCTCTTTTTCCTCGCTCTCCAAACGCCCCGTCACCGGAACCCTAAACTCTCCCCCGGCCTCCGGATACGCCCCGGTTACTCCTCCTACGATTCCTACATTCAGCACCAGCTCAACAAGACCCTCAACCCCAAACTCCGAAAAATATGGACCACCCGAGACTGGGACCGAAAAGTCCTCGTTTTCTCTCAGTTTTTCCGGGGTTTGAAGGAGAGAAAGCTTCTGTTTAACGACTCGAAGGCGCTTTGCATCGGAGCCCGGGTCGGACAGGAGGTGGAGGCGTTGAGGCGAGTCGGAGTGGGTGACTCGGTGGGGATGGATCTGGTGCCGTACCCTCCACTGGTGTTGAAGGGCGACTTTCATTCCCAGCCGTTCGATGACGAGACTTTTGATTTTGAATTCTCGAATGTATTTGACCATGCGTTGCATCCGTGGAAGTTCGTTAGGGAGATCGAACGGACGTTGAGAGCCGGTGGGATCTGTGTGTTACACGTGGCGCTGTCTAGACGAGCTGATAAGTACTCGGCCAATGACTTGTACAGCGTGGCGCCGTTAGTGGAGTTGTTTCGGAAATCGGATTTGGTTGGGGTCCGAAACGTTGATGGTTTCGGGTTGGACACTGAGGTGGTTTTCAGGAAGAAAGAGAAGGAGAAGAAGAATTAA 759 0.527 MQNVHAGMKNPILKLPLLLLKPFFLSLFLSLAVLFFLALQTPRHRNPKLSPGLRIRPGYSSYDSYIQHQLNKTLNPKLRKIWTTRDWDRKVLVFSQFFRGLKERKLLFNDSKALCIGARVGQEVEALRRVGVGDSVGMDLVPYPPLVLKGDFHSQPFDDETFDFEFSNVFDHALHPWKFVREIERTLRAGGICVLHVALSRRADKYSANDLYSVAPLVELFRKSDLVGVRNVDGFGLDTEVVFRKKEKEKKN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0983 252 CDD AdoMet_MTases 147 199 - -
Vvi17g0983 252 Gene3D Vaccinia Virus protein VP39 62 235 IPR029063 -
Vvi17g0983 252 PANTHER F21J9.14 20 249 - -
Vvi17g0983 252 Pfam Methyltransferase domain 116 195 IPR013216 GO:0008168
Vvi17g0983 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 232 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0983 Vvi-Chr17 11854605 11855363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0983 - - vvi:100248419 456.832