Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0977 ATGGAGAAGACTAGCGTACGAGTTCTGTGCCCTAAGCTCTTGATCATCAGAAACGTTTCGGGGCTCCAATGGCTTATCGGATCCCCATTTTTTCCTCAATTCACCATCGTCTCCACTCTCACATGCATTCACACTCTCGGCGACTCAACTTCTCCGGATTACAACAAGGAATCTGAGGATCTTCGGACGTTGCTGTTGAGAGGATTCCATGTCATTGGAGCATTAGTTGTTGGAAGCAAATGTGATTTGGAGCGGGTTGCCGGTGAGGCCGCCGATGCCTCACGCAGAATGAGGAAGTTTCTCTACGGTGACGAATATGGAGGAAAATTAGGAAATCAAGATTTGATTGGGGCAGTTGCAGATTCGGAAAGTGGGGAAATTCACTTTTTCGTGTCAAGAGGGGAGAATCCGGCTGGCCTTGAGTGCGTTAGTTCTGTTATTTATGAAGATAACTCTGGAAAGTATGTTTGGGATACTGGTTGTCTACTCCATTGTGTGCTTCCGATTAAGTTGCCGTTCTACTTTCCGGTGAATAGTCCGTCCGATGCAGGAGAGATGTATCTGCGTGCAACTGATGTGATTATTGCTAAGTTAAAAGATTCGGATGTCACGTATATGGTAGAAACATTAAATGAAACATCTGTAGAAGCACCTGGGCCTGTCATTCTTCATGGTGCAAAATTGGATTTTCATGCAGATCTCTTTGATGTCAATCAATTTGGTGACAGCAGTCAAGGATCTGGTGCAAAGTCTTTTCCGTGCTCATATTTTTGTTCAAAAAATAAAGCTGTCTTTTCTGTGGAGCATGCAGATATAATTCAAGTAAGTCTACTGCTTAATAAGTCAAGAACTTCTTCAAAATCTGCTGCACCTATTGCAGAATATTTTCCAGCTTCAGAGCAAACCAAACTTTTGGTTGTAGATTACAAGCTAGAAGTGCTTTGTTACGCAGCAAAGGATCTTCCAGTGACTTATGCAGTTTCCAAGTTAGTCGTCCCTGGCTTAGTTGACCAATTAAATTCAATAAAGAACACAATATTGCCCAACCTCCTAACACAACATCTTCAGCTACATCCATACCACTTCTGTCCTCCTGGGTTTTTGCATCCAATAACAGTTATATATGAACTCAGTTATGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGAAGATCCCTACATTCAAGGCTGGGATTACCATTTGATCGTCCTCTCCTACGAATTGCTAATGCCCTAAATTTATCTACAACCAAAGATAGTGCAAAGAGCAATTCAATAAGAAAGGGTTCTTCTTTGCTTAGAGATGTACATGTTGGGATTCCAAGCAGTGGGGTTTCTGGAGGTGTTGTCTCTTTGGTTCAGGGTTCTTATGAATACTATCATTACCTTCAAGATGGCTTTGATGATTCGGGCTGGGGTTGTGCTTACCGTTCACTGCAAACCATTGTTTCTTGGTTCAGATGCCAACACTACTCATCCATTGAGGTTCCTTCACACCGGGAAATACAACAGGCTCTTGTGGAGATTGGAGATAAGGATCCTTCTTTTGTCGGTTCACGTGAATGGATTGGTGCCATTGAATTAAGCTTTGTTTTGGACAAACTTCTGGGTGTCAGTTGCAAAGTCATAAATGTAAGATCTGGAGCTGAGCTTCCTGAAAAATGTCGAGAACTGGCTTTGCATTTTGAGAACCAAGGAACACCCATCATGATTGGTGGTGGTGTTCTTGCATATACCCTGCTGGGAGTTGATTACAATGAATCCAGTGGAGATTGTGCATTTCTGATTCTTGACCCCCACTACACTGGCAACGATGATCTGAAGAAGATTGTGAACGGTGGTTGGTGTGGGTGGAAAAAAGCCGTCGATAGCCGGGGCAAGAATTTCTTCTTACATGATAAGTTTTACAATCTACTACTTCCACAGAGGCCCAACATGGTTTAA 1944 0.427 MEKTSVRVLCPKLLIIRNVSGLQWLIGSPFFPQFTIVSTLTCIHTLGDSTSPDYNKESEDLRTLLLRGFHVIGALVVGSKCDLERVAGEAADASRRMRKFLYGDEYGGKLGNQDLIGAVADSESGEIHFFVSRGENPAGLECVSSVIYEDNSGKYVWDTGCLLHCVLPIKLPFYFPVNSPSDAGEMYLRATDVIIAKLKDSDVTYMVETLNETSVEAPGPVILHGAKLDFHADLFDVNQFGDSSQGSGAKSFPCSYFCSKNKAVFSVEHADIIQVSLLLNKSRTSSKSAAPIAEYFPASEQTKLLVVDYKLEVLCYAAKDLPVTYAVSKLVVPGLVDQLNSIKNTILPNLLTQHLQLHPYHFCPPGFLHPITVIYELSYGETEMKQVEVRRSLHSRLGLPFDRPLLRIANALNLSTTKDSAKSNSIRKGSSLLRDVHVGIPSSGVSGGVVSLVQGSYEYYHYLQDGFDDSGWGCAYRSLQTIVSWFRCQHYSSIEVPSHREIQQALVEIGDKDPSFVGSREWIGAIELSFVLDKLLGVSCKVINVRSGAELPEKCRELALHFENQGTPIMIGGGVLAYTLLGVDYNESSGDCAFLILDPHYTGNDDLKKIVNGGWCGWKKAVDSRGKNFFLHDKFYNLLLPQRPNMV* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0977 647 PANTHER UFM1-SPECIFIC PROTEASE 2 66 647 - -
Vvi17g0977 647 FunFam Probable Ufm1-specific protease 2 430 647 - -
Vvi17g0977 647 Gene3D - 430 647 - -
Vvi17g0977 647 SUPERFAMILY Cysteine proteinases 469 604 IPR038765 -
Vvi17g0977 647 Pfam Peptidase family C78 450 639 IPR012462 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0977 K01376 - vvi:100263796 1287.32