Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0970 ATGGCGGCCAACAGCACTAACCCGGCTCTGGAACGGGATCCGGATCGCCCAGACCACCCGGGTCTGGAGTTGGCTCAATTCGGAGCAGGGTGCTTCTGGGGGGTGGAGCTTGCGTTTCAGCGACTTGTTGGGGTGGTGAAGACGGAGGTGGGGTTCTCTCAGGGCCACGTCCCTGACCCAACCTATAAGCTCGTCTGCACCGGAACCACCAACCATGTGGAGGTGGTTCGGGTCCAGTTCGACCCCGATGTGTGCCCCTACTCCAACCTCCTCTCTCTCTTCTGGTCTCGGCACGATCCCACCAGCCTCAATCGCCAGGGTGCTGATGTGGGCACACAGTACCGATCGGGGATATACTACTACAATGAGGCCCAGGCTCGTTTAGCTCGTGAATCATTGGAAGCTAAGCAGAAGGAGTTGAATGATAAGAACATTGTCACTGAAATTCTTCCAGCAAAGAGGTTTTACAGAGCAGAGGAGTACCATCAGCAATATCTGGAAAAGGGTGGAGGTAAAGGCTTACGCCAGTCTGCTGAAAAGGGCTGCACTGACCCCATCAGATGCTATGGTTGA 573 0.5532 MAANSTNPALERDPDRPDHPGLELAQFGAGCFWGVELAFQRLVGVVKTEVGFSQGHVPDPTYKLVCTGTTNHVEVVRVQFDPDVCPYSNLLSLFWSRHDPTSLNRQGADVGTQYRSGIYYYNEAQARLARESLEAKQKELNDKNIVTEILPAKRFYRAEEYHQQYLEKGGGKGLRQSAEKGCTDPIRCYG* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0970 190 Gene3D Peptide methionine sulphoxide reductase MsrA 10 190 IPR036509 GO:0008113
Vvi17g0970 190 FunFam Peptide methionine sulfoxide reductase 11 190 - -
Vvi17g0970 190 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 3 189 - -
Vvi17g0970 190 Pfam Peptide methionine sulfoxide reductase 25 169 IPR002569 GO:0008113
Vvi17g0970 190 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 24 168 IPR002569 GO:0008113
Vvi17g0970 190 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 22 180 IPR002569 GO:0008113
Vvi17g0970 190 Coils Coil 121 143 - -
Vvi17g0970 190 SUPERFAMILY Peptide methionine sulfoxide reductase 18 171 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0970 Vvi-Chr17 11635767 11636942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0970 K07304 - vvi:100255310 399.053