Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0966 ATGGCTGCCAAGTTGGCTTTCTTCCCACCAAACCCTCCATCCTACAAGCTAATTACGGACGATGCCACCGGCCTCTTGCTCTTCAACCACTTCCCCCACCGCGAAAACGTCGACATTTTGAAGCTTCCGACGCGCCGCGGCACCGAGATCGTGGCCCTCTATGTGCGGTACCCCATGGCCACCTCTACGCTGCTCTATTCCCATGGGAATGCGGCTGATATCGGCCAGATGTACGAGCTCTTCATCGAGTTGAGCATTCACTTGCGGGTTAATCTCATGGGGTATGATTATTCTGGCTATGGGCAGTCTTCAGGAAAGCCAAGTGAGCACAATACTTATGCAGATATTGAAGCTGCATATAAATGTCTTGAAGAAAGCTTTGGTGCGAAGCAGGAAGACATCATCCTTTATGGTCAGTCTGTTGGAAGTGGGCCTACTTTGGATCTTGCAGCTCGTTTGCCTCGATTAAGAGCTGTTGTTTTGCATAGTCCAATACTCTCAGGCTTACGAGTCATGTATCCTGTGAAACGTACATATTGGTTTGATATCTACAAGAATATTGACAAAATCCCATTGGTGCAGTGCCCTGTACTAGTGATTCATGGCACAGCTGATGAAGTTGTTGACTGCTCTCATGGCAAGCAGCTTTGGGAACTCTGCAAAGAGAAGTATGAACCCTTATGGTTAAAAGGGGGGAATCATTGTGATCTGGAGCTGTATCCAGAATACATTAAACATCTCAAGAAGTTCATATCCACAGTGGAAAAATCACCTTCCCGGAGGAGCAGTGCAAGGAGAAGTGTAGACCGGCCAGAATATTCCAGGAAGAGTACTGATTGTTATGAGGCTCCAAGGAAGAGCACAGATCAGGCTCCAAGGAAGAGCACGGATCAGGCTCCAAGGAAGAGCACTGATAGGAGAGACAAACCAAGGCGGAGCACTGACAGGCCTGAAAAACTGAAACTCTATGACTACAAGTCTAATGATGTTGACAAGCTTGAGAAGTTAAGAACCTCTCTTGATCAGGTAGAGAGATCTCGGAGAAGCGTGGAATACAATGATAAGTCTCGGAGAAGCATCAACCAACAGTTGGAAAGAGCACGGAAGAGCGTGGATTGGTTGGACAGAATACGTGCCGGATAA 1143 0.4742 MAAKLAFFPPNPPSYKLITDDATGLLLFNHFPHRENVDILKLPTRRGTEIVALYVRYPMATSTLLYSHGNAADIGQMYELFIELSIHLRVNLMGYDYSGYGQSSGKPSEHNTYADIEAAYKCLEESFGAKQEDIILYGQSVGSGPTLDLAARLPRLRAVVLHSPILSGLRVMYPVKRTYWFDIYKNIDKIPLVQCPVLVIHGTADEVVDCSHGKQLWELCKEKYEPLWLKGGNHCDLELYPEYIKHLKKFISTVEKSPSRRSSARRSVDRPEYSRKSTDCYEAPRKSTDQAPRKSTDQAPRKSTDRRDKPRRSTDRPEKLKLYDYKSNDVDKLEKLRTSLDQVERSRRSVEYNDKSRRSINQQLERARKSVDWLDRIRAG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0966 380 SUPERFAMILY alpha/beta-Hydrolases 38 254 IPR029058 -
Vvi17g0966 380 Pfam Serine aminopeptidase, S33 63 168 IPR022742 -
Vvi17g0966 380 Coils Coil 333 353 - -
Vvi17g0966 380 Gene3D alpha/beta hydrolase 37 251 IPR029058 -
Vvi17g0966 380 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 4 257 - -
Vvi17g0966 380 MobiDBLite consensus disorder prediction 258 324 - -
Vvi17g0966 380 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0966 Vvi-Chr17 11600377 11606205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0966 K01076 - vvi:100267319 750.74