Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0961 ATGCTATCTCCTCTTGTGTTAGCTTACACTTGCCGCTATTGTGCGCCGCTTAACCACCTCTTAACCTTCACCCTCCACCAGCATCACCACCACCGGCACTCCCTCGCCATCTCTGCGCCCTCGACCACTCTATCTTGTCTGCATACCCCAAATCCTAGGTTCCTAACGGGGAACTCTCTCGTTTTCAAGATGGAGCGATTCTTTTCTGGAAGTGGGATCAATAAGAATAAAGCAATGGTGGAGCACTTGCAGCGCTATGGAGTGATTAATTCGAAAAAGGTAGCTCAAGTAATGGAGACTGTTGACAGAGCATTGTTTGTGCCTGATGGGAACCCACCTTATGTTGACAGCCCCATGCAGATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCCACATGCCTCGAGCTGTTGCAGGAAAATTTGCAGCCTGGAATGCATGCTCTAGATGTTGGTTCTGGAACGGGGTATTTGACAGCCTGCTTTGCACTGATGGTTGGACCACAAGGTTGTGCAGTTGGAGTAGAACACATACCTGAGTTGGTTGCTTCTTCAATCAAGAATATCGAAAAGAGTGCAGCGGCTCCGTTATTAAAAGAAGGTTCTCTCAAACTGCATGCCGGTGATGGAAGGCTAGGTTGGCCTGAGTGTGCACCATATGATGCAATTCACGTCGGAGCCGCAGCACCTGAGATACCACAGCCACTTATTGATCAGTTGAAGCCCGGTGGTAGAATGGTCATTCCTGTTGGGAACATATTCCAGGATTTGAAGGTAGTGGACAAGAACCTGGACGGCTCCATCAGTATCCGCAGCGAGACTTCTGTCCGCTATGTTCCACTGACAAGTCGGGAGGCTCAGTTGCGCGATTATTGA 882 0.4909 MLSPLVLAYTCRYCAPLNHLLTFTLHQHHHHRHSLAISAPSTTLSCLHTPNPRFLTGNSLVFKMERFFSGSGINKNKAMVEHLQRYGVINSKKVAQVMETVDRALFVPDGNPPYVDSPMQIGYNATISAPHMHATCLELLQENLQPGMHALDVGSGTGYLTACFALMVGPQGCAVGVEHIPELVASSIKNIEKSAAAPLLKEGSLKLHAGDGRLGWPECAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNLDGSISIRSETSVRYVPLTSREAQLRDY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0961 293 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 75 287 - -
Vvi17g0961 293 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 72 291 IPR000682 GO:0004719|GO:0036211
Vvi17g0961 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 260 IPR029063 -
Vvi17g0961 293 Gene3D Vaccinia Virus protein VP39 70 293 IPR029063 -
Vvi17g0961 293 CDD AdoMet_MTases 151 252 - -
Vvi17g0961 293 FunFam Protein-L-isoaspartate O-methyltransferase 68 293 - -
Vvi17g0961 293 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 210 225 IPR000682 GO:0004719|GO:0036211
Vvi17g0961 293 NCBIfam protein-L-isoaspartate O-methyltransferase 75 289 IPR000682 GO:0004719|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0961 K00573 - vvi:100262152 575.474