Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0959 ATGGGGGTTTTTGTTGATCAAAGAAAATGGTGTGGTATTGGAGGTGGTGGTGCCAAGATGACGATCACTGCCAAGCCTAGCATCACTGACAGTGGCCTAATGGTGGGTGGCAGAGTTGTTTGCAACAGAGTTGCAGAAAATCTCGTCGTTTCACCAGAGAGCTCCGGGTCAGCTTTCCTTGGTGCCACTTCACCAGCGCCAAGATCACGTCATGTGTTCAATGTTGGTGTTCTTGAGGGATACAGGTTCATTTGCCTCTTTAGGGCTAAATTTTGGTGGATGATACCGCGAGTAGGAAAATCAGCGAGTGAAATTCCAATGGAAACTCAAATGCTTCTCTTGGATGTAAGAGAAGAGTCTGCCCTTGATGACGAGAATTCTTCTGACATGACTTCTGAAAGCACATTCTATGTTCTGTTTTTACCCGTGTTGGATGGACCCTTTCGGACAAGTTTACAAGGGACTTCTGAAAATGTGCTCCAGTTCTGTGTAGAAAGTGGAGATCCCAGTGTCCAAGCCTCCCAAGTGTTGGAAGCAGTTCTAATAAATTCAGGGGACAACCCATTTGAGCTCCTTAAGAACTCTATCAAGATACTGGAGAAACGCAAAGGTACTTTTGCTCACATTGAACACAAAAAGGCTCCTCCACATTTGGACTGGTTTGGATGGTGCACATGGGATGCTTTTTATACTGAAGTCAATCCACAAGGCATAAGAGAGGGTCTTCAAAGCTTTTTAGAAGGAGGCTGTCCACCAAAATTCTTGATCATTGATGATGGATGGCAAGAGACGATAAATGAGTTCCACAAAGGAAGTAAACTGCATATAGATGGGACACAGTTTGCAACCAGATTGGTGGATATAAGAGAAAATAGTAAGTTCAAGAGCTCTGGTTCAGAGAGTTCATGCATTGACCTACATGATTTTATTCAGACCATCAAAGAGAGATACAGACTCAAATTTGTTTATATGTGGCATGCTATAATTGGCTATTGGGGAGGGGTCCTTCCATCTTCCAAAATGATGGAAAAATACAATCCCAAGCTTGCATACCCAATTCAATCACCTGGCAACATAGGAAATCTTAGAGATATTGCTGTGGACAGCTTGGAGAAATATGGAGTTGGGATGATTGACCCTGAAAAAATCTTTCATTTTTATAATGATCTGCATGGCTATCTTGCTAGTAGCGGAGTAGATGGAGTGAAGGTGGATGTTCAGAATATATTAGAAACCATAGGTAAGGGGTATGGTGGAAGGGTTTTGCTGACTAGACAATATCAATTTGCACTGGATGAATCTATTGCGAGAAATTTCAAAGATAACAGCCTGATTTGCTGCATGAGTCACAACTCAGATTCCATTTACAGTTCAAGGAAGAGTGCAGTTGCAAGAGCATCAGAGGATTTCATGCCAAAGGAACCAACATTTCAGACTGTACATATTGCCTCTGTAGCTTTTAACAGTCTTCTGCTTGGGGAGATTGTGGTACCGGATTGGGACACGTTCCATAGCAACCATAGCACAGCTGAGTTTCATGGGGCAGCAAGAGCGTTGGGTGGCTGTGCAGTATATGTAAGTGACAGGCCAGGCACACATGATTTCAGGATCCTCAAAAGGCTAGTATTGCCTGATGGATCTGTACTGAGAGCTAAATATCCTGGCAGACCTACGCGGGACTGCTTATTCAAGGACCCAGTCATGGATGGGGAAAGTCTGCTGAAGATTTGGAATTTGAACAAGTTATCAGGGGTTGTTGGTGTTTTCAATTGCCAAGGAGCAGGAAATTGGCCAATGAAAGATGCTGAAGCAGTGCCCGTCTTGGCATCTACACCTACCTTCCTTTCAGGACATGTCAGTCCCCTAGATGTTGAATATCTTGACCAAGTTGCAGGTGACAACTGGCGTGGAGACTCTGCTGTATATGCATTCTATTCAGGATCTCTTTCTAGATTGTCAAAGAAAGCAAACCTTGAAGTGTCCTTGGCAGTTCTAAAATGTGAAATTTTCACCATATGTCCAGTTAGGGTATTGGGTCAGAATCTTCAATTTGCTCCCATTGGATTGCTTGACATGTACAACTCCGGTGGAGCGGTTGAAGCTTTGGAGCATACTAATCATCCTGCAGGGTGCAGGGTAAAGATCAGTGTGCGGGGCTGTGGCCGATTTGGAGCATACTCAAGCAAAAAACCACTATCTTGTATTGTGGACATGCAGGAGGAAGAATTCCAATACAATGCTGAGGGTGGATTGTTGACACTTAAACTCCAAGGAGAATGCAGCTTAAGAGAGATCAAAATCGTGTATTGA 2310 0.4359 MGVFVDQRKWCGIGGGGAKMTITAKPSITDSGLMVGGRVVCNRVAENLVVSPESSGSAFLGATSPAPRSRHVFNVGVLEGYRFICLFRAKFWWMIPRVGKSASEIPMETQMLLLDVREESALDDENSSDMTSESTFYVLFLPVLDGPFRTSLQGTSENVLQFCVESGDPSVQASQVLEAVLINSGDNPFELLKNSIKILEKRKGTFAHIEHKKAPPHLDWFGWCTWDAFYTEVNPQGIREGLQSFLEGGCPPKFLIIDDGWQETINEFHKGSKLHIDGTQFATRLVDIRENSKFKSSGSESSCIDLHDFIQTIKERYRLKFVYMWHAIIGYWGGVLPSSKMMEKYNPKLAYPIQSPGNIGNLRDIAVDSLEKYGVGMIDPEKIFHFYNDLHGYLASSGVDGVKVDVQNILETIGKGYGGRVLLTRQYQFALDESIARNFKDNSLICCMSHNSDSIYSSRKSAVARASEDFMPKEPTFQTVHIASVAFNSLLLGEIVVPDWDTFHSNHSTAEFHGAARALGGCAVYVSDRPGTHDFRILKRLVLPDGSVLRAKYPGRPTRDCLFKDPVMDGESLLKIWNLNKLSGVVGVFNCQGAGNWPMKDAEAVPVLASTPTFLSGHVSPLDVEYLDQVAGDNWRGDSAVYAFYSGSLSRLSKKANLEVSLAVLKCEIFTICPVRVLGQNLQFAPIGLLDMYNSGGAVEALEHTNHPAGCRVKISVRGCGRFGAYSSKKPLSCIVDMQEEEFQYNAEGGLLTLKLQGECSLREIKIVY* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0959 769 FunFam Putative galactinol--sucrose galactosyltransferase 1 195 293 - -
Vvi17g0959 769 Gene3D Aldolase class I 194 285 IPR013785 -
Vvi17g0959 769 SUPERFAMILY (Trans)glycosidases 217 542 IPR017853 -
Vvi17g0959 769 PANTHER - 21 759 IPR008811 -
Vvi17g0959 769 Pfam Raffinose synthase or seed imbibition protein Sip1 46 755 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0959 Vvi-Chr17 11457671 11462115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0959 20 756 Glycoside Hydrolase AT1G55740 48.996 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0959 - - vvi:100245094 1529.61