Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0939 ATGGCTACGCGTGCGTTTCTCTTGACTTCACTGCTTCTCTCTTGCTTGTTGCAGATTTGTTCTGGTGCCTATTTTTCATCTCTCCAACGAACTCTAATTGTCACAGCTTCACCCAAAGCTGGAGAAGTTCTAAAATCTGGAGAAGACAAAATCACTGTGACATGGGGTCTAAACCAGTCTTACCCAGCCGGGACAGACTCAGCCTACAAGACCGTGAAGGTCAAGCTCTGCTACGCGCCGATAAGCCAAGTGGACCGCGCCTGGAGAAAGACGGTGGACCACCTAACAAAAGACAAAACCTGCCAGCACAAGATTGTTTCACAGCCCTACAAAGCTTCCAACAATTCCGTAGAGTGGACTATAGAGAAAGACGTGCCGACAGCCACGTACTTCATACGCGCCTACGCGTATGACGCTGAGGATCAAGAGGTGGCATACGGACAAACCACAGACGCCCACAAGACCACTAATCTCTTTGGCATTGAAGCAATCACAGGCCGCCATGCATCCCTTGACATTGCTGCCGTTTGCTTCTCTGCTTTCTCAGTGGTTTCACTTTGCGGGTTCTTCTGGGTGGAGAAGAGAAAGAGTAGAGTGGCCAAGTAA 606 0.4967 MATRAFLLTSLLLSCLLQICSGAYFSSLQRTLIVTASPKAGEVLKSGEDKITVTWGLNQSYPAGTDSAYKTVKVKLCYAPISQVDRAWRKTVDHLTKDKTCQHKIVSQPYKASNNSVEWTIEKDVPTATYFIRAYAYDAEDQEVAYGQTTDAHKTTNLFGIEAITGRHASLDIAAVCFSAFSVVSLCGFFWVEKRKSRVAK* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0939 201 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 1 198 IPR016605 GO:0010167|GO:0015706
Vvi17g0939 201 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Vvi17g0939 201 PIRSF NAR2 1 201 IPR016605 GO:0010167|GO:0015706
Vvi17g0939 201 Pfam High-affinity nitrate transporter accessory, Ig-like domain 25 166 IPR016605 GO:0010167|GO:0015706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0939 - - vvi:100258771 396.741