Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0934 ATGCAAGACCCAATTGGGATTCCTGCTTGCTTTTCATCTGTTGAGAAGCAAACTGATGACCCAGCTGCTGTTACAAGGTCTGGGCAGAGTGTTTTCATGTATGTATACCGCACGAAAATTGCAGATCAGTGCCGCCTGATTACCATCACTTGGTGCAAGAATTTGCTGCTTCATGGCCTATCAGTGGCAGTGGAAGGCCCGGATGGGGAGAGCCAATACACCTGCAAGGTGGAGCTGAAGCCATGGTACTTCTGGAGGAAACAAGGCTCCAAGCGCTTTGTAGTTGATGATAAGCCTGTTGACATCTTCTGGGACCTTAAGGCTGCAAAATTCAATGGAGAAACCGAGCCAAGCTCAGAGTACTATGTGGCAGTTGTGTGCAATGAAGAGGTTGTGCTACTTCTTGGCGATCTAAAGAAGGATGCATACAGGAAGACAGGTTGCAGACCGGCTCTCATCGATCCAATTTTGGTTTCAAAGAAGGAGCACATATTTGGAAAGAAGAAGTTCTCTACAAAAGCTAAGTTCCATGAGAGAGGCAGATTCCATGACATCTCAATTGAGTGCAAGAACAGAAGTGGTGGCAGTGGTGGGAGCATGGGTAATGGCAATTCCTGTGGTAGGGTTGATCCAGAAATGGAGATAAGGATAGATGGCCATTTGGTCATTCATGTTAAGCATCTCCAGTGGAAGTTCAGAGGTAATGAATCCATTCATGTCAACAAACTAAGAGTGGAGGTGTATTGGGATGTCCATGACTGGCTCTTTAGCCCTGGTTTAAGGCATGCTCTATTTATCTTTAAACCACTTATGTCATCCACATCACCAACATCGATATCAATATCAACTTCCTCGTCTCTGCCATTATCATCACTGACATCAACAACACCATTGTCATCTCAAACTGGGAGCTGTGATGCAGCAGAGGGGTTCAATGCTGGTGGGTCATCTGAGTTTTGCTTGTTTCTCTATGCCTGGAAGGTTGAATGA 990 0.4556 MQDPIGIPACFSSVEKQTDDPAAVTRSGQSVFMYVYRTKIADQCRLITITWCKNLLLHGLSVAVEGPDGESQYTCKVELKPWYFWRKQGSKRFVVDDKPVDIFWDLKAAKFNGETEPSSEYYVAVVCNEEVVLLLGDLKKDAYRKTGCRPALIDPILVSKKEHIFGKKKFSTKAKFHERGRFHDISIECKNRSGGSGGSMGNGNSCGRVDPEMEIRIDGHLVIHVKHLQWKFRGNESIHVNKLRVEVYWDVHDWLFSPGLRHALFIFKPLMSSTSPTSISISTSSSLPLSSLTSTTPLSSQTGSCDAAEGFNAGGSSEFCLFLYAWKVE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0934 329 Pfam Plant protein of unknown function (DUF868) 27 327 IPR008586 -
Vvi17g0934 329 PANTHER EXPRESSED PROTEIN 7 327 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0934 Vvi-Chr17 11012211 11013200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0934 7 329 EF-hand Containing Proteins AT5G28150 39.144 4.77e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0934 - - vvi:100243254 630.557