Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0929 ATGAGAAATTACCCTGACAAGGTGGGCAACCATGAGTTTGAACAACATGAAGAGCTGCTGATTCAACATTGTAAACATCTTGAAAGGATACCTAAGGATATCTTGGATGTATTCATGTCTATAGAGGACCTTCAGGCAATGGTGATTGAAATAATGGAGGAGAAACCAGAGCTTGCATCCATGTCGGCTGGTTTTCCAATACTTAGGATTCAGGATGAGGAAGGAGATGATGACGCAAGAGCTTATTTCCCATGCCCCTTCTGTTATGTGGACATTGAAATTCCAGTGCTCTGTAGCCATCTGCAGGAGGAGCACTGCTTTGACTTAAAAAATGCGGTTTGTCCCTTGTGTGCGGCAAATCTAGGAAAGGATGTGATTGGACATTTCACATTGCAGCATGCCCATTCATTAAAGCGGAGGAGAAAGTCTCAAAAATCTGGTGCCTGGACAAATAGCCCCCTTAGAGAATTGAGCTCATTTCTGGGCTCTAGGGGAAACTCATATGAATCTGCACCTGATCCACTCCTTTCACCGTTTCTCTGCAGTATATCTGTTTCAGATGGCAACCAGCAAGATAAATGCTCTAGTGATAATGCCTCATTTGCTTCTGATATGAAAAGCACTGTGCCATCAACACCGAGTGAAGGCCAAGAACAAGATTATGAAGAGAGACAGCAGAGAGCCATTTTTGTTCAACAGTTGATTGGGTCAACCATTTTCTAG 723 0.4329 MRNYPDKVGNHEFEQHEELLIQHCKHLERIPKDILDVFMSIEDLQAMVIEIMEEKPELASMSAGFPILRIQDEEGDDDARAYFPCPFCYVDIEIPVLCSHLQEEHCFDLKNAVCPLCAANLGKDVIGHFTLQHAHSLKRRRKSQKSGAWTNSPLRELSSFLGSRGNSYESAPDPLLSPFLCSISVSDGNQQDKCSSDNASFASDMKSTVPSTPSEGQEQDYEERQQRAIFVQQLIGSTIF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0929 240 PANTHER PROTEIN DEHYDRATION-INDUCED 19 65 240 IPR033347 -
Vvi17g0929 240 MobiDBLite consensus disorder prediction 192 225 - -
Vvi17g0929 240 Pfam Drought induced 19 protein (Di19), zinc-binding 82 134 IPR008598 -
Vvi17g0929 240 MobiDBLite consensus disorder prediction 192 216 - -
Vvi17g0929 240 Pfam Stress-induced protein Di19, C-terminal 157 239 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0929 Vvi-Chr17 10950004 10954515 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0929 - - vvi:100253625 348.206