Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0918 ATGTCTGGACTTTTTCCCAACCCAAATCTAGAAGCATCAATGATGTCAATCAGTCTAAACACAAGCTTAGTGGTATTCAGAATTCCCTTTGGTTTTGGCAGTGCAGTGAGCATGAGAGTTTCAAATGAATTAGGTGTAGAGAGACCACGGGCTGCACAAATTGCAATACAGGTTGTGATATTCCTGGCCATTACAGAGGGCCTGTTACTAAGCCTACTTGCAGTTGCGGTGTGA 234 0.4359 MSGLFPNPNLEASMMSISLNTSLVVFRIPFGFGSAVSMRVSNELGVERPRAAQIAIQVVIFLAITEGLLLSLLAVAV* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0918 77 Pfam MatE 14 75 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vvi17g0918 77 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0918 Vvi-Chr17 10834371 10834817 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0918 K03327 - vvi:100243357 117.087