Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0917 ATGATATCTATCATGTTTGTTGGCCATCTTGGGGAGCTTTCTCTATCAAGTGCTTCCATTGCCACTTCATTTGTAGGAGTCATTGGTTTTAGCTTCATGCTAAGAATGGGAAGTCCACCAGAAACATTATGTGGACAAGCCTATGGAGCAAAACAGTATCATATGCTAGGTATATACATGCATAGGGTTCTACTCGTTCTTATGCTAATGTGCATTCCAATAGCATTCATCCGGGCCTATACAACTCAAATGTTCAAAATGGTTGGCCAAAACCCGAAAATTTCAATGCAAATTGGAATTTATGCTCGTTGGTTTATACCTAGTATTTTTTCTTATGGCATCTTTCAGTGCCAACTCAGATTTCTACAGGCTTAA 375 0.3867 MISIMFVGHLGELSLSSASIATSFVGVIGFSFMLRMGSPPETLCGQAYGAKQYHMLGIYMHRVLLVLMLMCIPIAFIRAYTTQMFKMVGQNPKISMQIGIYARWFIPSIFSYGIFQCQLRFLQA* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0917 124 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 124 - -
Vvi17g0917 124 Pfam MatE 1 123 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0917 Vvi-Chr17 10831436 10833944 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0917 K03327 - vvi:100243357 188.734